Gene LACR_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0188 
Symbol 
ID4433878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp173008 
End bp174105 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content37% 
IMG OID639665990 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_808228 
Protein GI116511012 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA ATATAACAAC AGAAACACGT CCGTCTATCT ATGGATTGAC ACGTGATCAA 
TTAATCGAAT GGGCCATTGA AAATGGTGAA AAGAAATTCC GAGCAACACA AGTTTGGGAT
TGGCTTTACC GCAAACGTGT TCAATCTTTT GAAGAAATGA GCAACTTATC AGCGGTATTT
ATTGATAAAC TTAATGAAGC TTTCATTTTG AATCCATTGG AACAAGTGGT TGTGCAAGAG
TCTGCTGACG GAACAGTTAA ATACCTCTTT ATGCTTCCTG ATAAAGTGAT GATTGAAACA
GTTTTAATGC GCCAATCTTA TGGTTTGTCT GTCTGTGTCA CCACTCAAGT GGGCTGCAAT
ATGGGCTGTA CCTTCTGTGC TTCTGGTATT TTGAAAAAAG AACGCGATGT AACAGCCGGT
GAAATCGTTA GTCAAATCAT GCTTGTACAA AAGTATTTTG ATGAACGTGG TTTAGACGAA
CGTGTTTCGC ATGTTGTTGT TATGGGAATT GGTGAACCCT TTGATAATTA TGAACATTTG
ATGAACTTTT TACGTGTGAT TAATGATGAT AACGGACTTG CTATCGGTGC TCGTCATATT
ACTGTTTCTA CTTGCGGATT TATGCCAGCA AAAATCAAAG AATTTGCTCA TGAAAATCTT
CAAATCAATC TAGCTATTTC ACTCCATGCT CCAAATAATG AATTGCGTAC TTCATTGATG
CGAATTACTC GTAATGCCCC TCTTGAAAAA CTCTTTGAGG CGATTGATTA TTATACAGAA
ACGACCAATC GACGGGTGAC TTATGAGTAC ATTATGTTGT CTGGTGAAAA TGACAGCCCT
GAAATCGCGC AACAGCTGGC AGATTTAATT AAACCCCGTA ATAAATTGTC TTATGTCAAC
TTGATTCCCT ATAATCCAGT TGCTGAACAT ATCAAGTATG AACGTTCAAC AAAAGATAAT
ACTGCAAAAT TCTATGATGT TTTGAAGAAA AATGGTATTA ACTGTGTCGT TCGTCAAGAA
CATGGAACAG ATATTGATGC GGCTTGTGGA CAATTAAGAT CAAAACAAAT TAAGAAAAAC
AAGGCCAAAT TAGCCTAA
 
Protein sequence
MTENITTETR PSIYGLTRDQ LIEWAIENGE KKFRATQVWD WLYRKRVQSF EEMSNLSAVF 
IDKLNEAFIL NPLEQVVVQE SADGTVKYLF MLPDKVMIET VLMRQSYGLS VCVTTQVGCN
MGCTFCASGI LKKERDVTAG EIVSQIMLVQ KYFDERGLDE RVSHVVVMGI GEPFDNYEHL
MNFLRVINDD NGLAIGARHI TVSTCGFMPA KIKEFAHENL QINLAISLHA PNNELRTSLM
RITRNAPLEK LFEAIDYYTE TTNRRVTYEY IMLSGENDSP EIAQQLADLI KPRNKLSYVN
LIPYNPVAEH IKYERSTKDN TAKFYDVLKK NGINCVVRQE HGTDIDAACG QLRSKQIKKN
KAKLA