| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0181 |
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| Symbol | |
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| ID | 4434666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 166511 |
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| End bp | 167995 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639665983 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_808221 |
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| Protein GI | 116511005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.113932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGAA TTACTGCGTG GATGGAGAAA TATCTCGTCC CTGTTGCGGC AAAGATTGGG
TCTCAAAAAC ACCTAGTTGC GCTGCGTGAC TCATTTATCG GTATGTTGCC AGCAACACTT
GCTGGTGCCT TGGCTGCAAT GGTTTCGGCT ATTGTAACAA CATTCCCATC AGCTATCCAA
CAAATGATGT TGGGAGCAAC AGCATTCTCA AAATTAGCAC CAGAAAAAGT CTGGACACTT
GCTAATACAC CAATTATTGG TGATTTGAAC AATATTTCAG CCCTTGTTAA CCAAGGAACA
CTGACAGTTA TTGGTCTTAT CTTTGCCTTT TCTTGGGGTT ACAATTTGGC CCGTGCTTAC
GGAGTCAACG ACCTCGCTGG TGGTATCGTA TCAGTTGCAA CCCTATTTGC AGGTTTGCCA
AACCAAATGG GTAAATTTAC AGCAGCCCTT GGGACAGGTA AAGCTGGTGT AGCAGCAACT
GACAAGATCA ATGGCGTACT TGGAGATCAA GGACTTGCCG CTTGGAAACC ACTCTTTGCC
TCAGCTCACC TCGATGCTGG AGCTTACTTC ACAGTTATTA TTATGGGTGC CCTTGCAGTT
ATTATTTATG CAAAACTCAT GCTTGCTGAC ATCACAATTA AGATGCCAGA ATCAGTTCCA
CCTGCAGTAG CAAAAGCTTT CTTGGCTATC ATTCCTACAA TCGCAGCCCT TTATATCGTC
GGCTTAATCT ACTACATCAT TGGTAAATTA ACTAATGACT CTGTCATTAA CCTTATCACT
CACTACATCG CAGAACCGTT CCAAATTCTG TCACAAAATA TCTTCTCAGT ACTGATTGTT
ACACTCTTTG TTTCAGTATT CTGGTTCTTC GGACTTCACG GACCAAACGT TTTGGCACCA
GTACTTGATG GTATCTGGGG ACCTCTTGGA CTTAATAACC AAGCCCTTTA CTTCCAAGTA
CACTCACAAG GTATCCGTGA CTTGATTGCT AAAGGTGCGG TTGATAAAGC TCATGCCATT
AATGGTGACT ATGTTAACCT TTGGGTACGT GGTTCATGGG ATGCCTTTGC ATGGTTTGGT
GGATCAGGTG GTACAATTAC ACTTGTTATT GCAATCATCC TCTTCTCTAA ACGTAAAGAC
TACAAGATTG TTGGACGTCT CGGACTTGCG CCAGGTATCT TCAATATCAA CGAACCAGTC
CTCTTTGGTC TACCAGTCGT CTTGAATGCG ATCTTCTTTA TTCCATTTGC AGTCGCTCCT
TTGATTTCTG TAATCATTGC CTACACTGCA ACAGCCCTTC ACTTGGTTGA CCCAGTCGTC
AATGCCGTTC CTTGGGTAAC ACCACCAATT ATGAATGCCT TCATGGCAAC CGGCTTTGAC
TGGCGAGCAA TTGTCCTTAC AATCATCAAC TTAATCATCA CCTTCGTTAT CTGGGTACCA
TTCGTTATCG CAGCTAACAA GTTGGAAGAA ACAGAACTCG ACTAA
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| Protein sequence | MNGITAWMEK YLVPVAAKIG SQKHLVALRD SFIGMLPATL AGALAAMVSA IVTTFPSAIQ
QMMLGATAFS KLAPEKVWTL ANTPIIGDLN NISALVNQGT LTVIGLIFAF SWGYNLARAY
GVNDLAGGIV SVATLFAGLP NQMGKFTAAL GTGKAGVAAT DKINGVLGDQ GLAAWKPLFA
SAHLDAGAYF TVIIMGALAV IIYAKLMLAD ITIKMPESVP PAVAKAFLAI IPTIAALYIV
GLIYYIIGKL TNDSVINLIT HYIAEPFQIL SQNIFSVLIV TLFVSVFWFF GLHGPNVLAP
VLDGIWGPLG LNNQALYFQV HSQGIRDLIA KGAVDKAHAI NGDYVNLWVR GSWDAFAWFG
GSGGTITLVI AIILFSKRKD YKIVGRLGLA PGIFNINEPV LFGLPVVLNA IFFIPFAVAP
LISVIIAYTA TALHLVDPVV NAVPWVTPPI MNAFMATGFD WRAIVLTIIN LIITFVIWVP
FVIAANKLEE TELD
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