Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0170 |
Symbol | gatA |
ID | 4434655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 155217 |
End bp | 156677 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639665973 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_808211 |
Protein GI | 116510995 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.132896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATACA ATAATAAATC AATCAAAGAA CTACATGAGC TTCTTGTAAA TAAAGAAATT TCGGCTCTTG AATTGACAAA GGCGACGCTT TCTGACATTC AAGCACGTGA ACCACAAATT GACGCTTTTT TGAAAGTCAC AGAAGAAAAA GCTTTGAAAG AAGCCGCAGC AATTGATGCT CGTGGAATTA ATCCAGATGT TGTGACTGAT GGAATTTCGA TTGGTGTCAA AGATAATATT GTTACAGAAG GTATCGAAAC AACAGCAGCT TCTAAGATTC TTGGTGGTTG GATTCCTCCT TATAATGCAA CAGTTGCTAA TAAATTGAGC CAATCTGGGT TAATTACAAT TGGTAAACTC AACATGGATG AATTCGCCAT GGGTGGGTCT GGTGAAAATT CTTCGATTAA GCCAACCAAA AACGTCTGGG ACCAAACAAA AGTACCTGGT GGATCTTCAT CAGGTTCCGC AGCTTCAGTT GCTTCTGGTG AGGTTCGTTT ATCACTCGGT TCAGATACTG GTGGCTCAAT CCGTCAGCCA GCTGCTTTCA ATGGAATTGT TGGTTTAAAA CCAACTTATG GTCGTGTCAG CCGTTTTGGC TTGATTGCTT TTGCTTCATC ATTAGACCAA ATCGGTCCAT TGACACCAAC AGTTGAAGAA AATGCTCAAC TTTTAAATGT CATTTCTGGC TTTGATAAAA ATGATAGTAC GTCATCAAAT GTTTCGGTTC CTGACTTTAC AAGTAAAATT GGTCAAGACA TTAAAGGAAT GAAAATTGCT TTACCTAAAG AATATTTTGG TGAAGGAATT GATGAAAAAG TCAAAGAACA AATTTTGGCA GCAGCTAAAC ATTTAGAAAA ACTAGGTGCC ATCGTTGAAG AAGTCAGTCT TCCTCATAGT AAATATGGTG TCGCAGTTTA TTATATTATC GCCTCTTCTG AAGCTAGCTC GAACCTCCAA CGTTTCGATG GAATTCGTTA TGGTTATCGC GCACAAGACA TCAAAAACCT TGAAGATTTG TATGTGAAAT CACGTTCTGA AGGATTCGGC CCTGAGGTTC AACGTCGAAT TATGTTGGGA ACTTTCAGTC TGTCAGCCGG TTCTTATGAT AAACATTTCA AAAAAGCAGG ACAAGTTCGT ACTTTAATCA TCAATGATTT TGCTAAAGTT TTTGAAAAAT ATGATTTGAT TTTAGGACCA ACAACTCCAA CAGCAGCTTG GGATTTAGGA GCACGTGTTG ATGACCCAAT CTCAATGTAT TTGGCAGATT TATTGACTAT TCCAGTCAAC TTAGCTGGTC TTCCAGGAAT TTCGATTCCT GCTGGTTTTG CCGATGGACT ACCTGTGGGA ATGCAATTGA TTGGTAAACG TTACGATGAA GAAACGATTT ATCAAGTAGC GGCTGCTTTT GAAGCAACGA CTGATTTCCA CAAAAAACAA CCGATTATTT TTGGAAAATA A
|
Protein sequence | MSYNNKSIKE LHELLVNKEI SALELTKATL SDIQAREPQI DAFLKVTEEK ALKEAAAIDA RGINPDVVTD GISIGVKDNI VTEGIETTAA SKILGGWIPP YNATVANKLS QSGLITIGKL NMDEFAMGGS GENSSIKPTK NVWDQTKVPG GSSSGSAASV ASGEVRLSLG SDTGGSIRQP AAFNGIVGLK PTYGRVSRFG LIAFASSLDQ IGPLTPTVEE NAQLLNVISG FDKNDSTSSN VSVPDFTSKI GQDIKGMKIA LPKEYFGEGI DEKVKEQILA AAKHLEKLGA IVEEVSLPHS KYGVAVYYII ASSEASSNLQ RFDGIRYGYR AQDIKNLEDL YVKSRSEGFG PEVQRRIMLG TFSLSAGSYD KHFKKAGQVR TLIINDFAKV FEKYDLILGP TTPTAAWDLG ARVDDPISMY LADLLTIPVN LAGLPGISIP AGFADGLPVG MQLIGKRYDE ETIYQVAAAF EATTDFHKKQ PIIFGK
|
| |