Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0168 |
Symbol | |
ID | 4434653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 153846 |
End bp | 154634 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639665971 |
Product | transcriptional repressor CodY |
Protein accession | YP_808209 |
Protein GI | 116510993 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000303115 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTACAT TACTTGAAAA AACACGTAAA ATCACCGCGA TTTTGCAAGA TGGAGTGACC GATTTGCAAC AAGAGTTGCC ATACAACAGT ATGACTGAAC GCTTGGCAAA CGTCATTGAT TGCAACGCCT GCGTGATTAA TACGAAGGGC GAGTTGCTTG GTTACTCATT GCCTTACAAT ACAAACAATG ATCGCGTTGA CCAATTTTTC TACGATCGTA AATTGCCTGA CGAATACGTT CGTGCAGCAG TACGTGTTTA CGATACAATG GCAAACGTTC CTGTTGATCG TCCTTTAGCA ATTTTCCCAG AAGAAAGTCT TAGCGATTTT CCAAAAGGTG TAACAACTTT AGCGCCTATC TATGGTTCTG GAATGCGTCT TGGAACATTT ATTATGTGGC GCGAAGATGG TGAATTTACA GATGACGATC TTGTTTTGGT TGAGCTTGCA ACAACAGTAA TCGGTGTACA ACTCTCAAAC CTTAAACTTG AACAAATGGA AGAAAATATC CGTAAAGACA CTATGGCAAC AATGGCTGTT AATACACTTT CTTACTCAGA AATGAAAGCT GTCAAAGCAA TTATTGAAGA ACTTGATGGT GAAGAAGGGC ATGTTATTGC CTCTGTCATT GCTGACAAGA TTGGTATTAC ACGTTCAGTG ATTGTTAATG CTTTACGTAA ACTGGAATCT GCTGGTGTTA TTGAATCACG TTCACTTGGT ATGAAAGGAA CTTATCTTAA AGTTCTTAAT ACTGGTTTGT TTGATAAACT TGCTGGACGT AATTTCTAA
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Protein sequence | MATLLEKTRK ITAILQDGVT DLQQELPYNS MTERLANVID CNACVINTKG ELLGYSLPYN TNNDRVDQFF YDRKLPDEYV RAAVRVYDTM ANVPVDRPLA IFPEESLSDF PKGVTTLAPI YGSGMRLGTF IMWREDGEFT DDDLVLVELA TTVIGVQLSN LKLEQMEENI RKDTMATMAV NTLSYSEMKA VKAIIEELDG EEGHVIASVI ADKIGITRSV IVNALRKLES AGVIESRSLG MKGTYLKVLN TGLFDKLAGR NF
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