| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0144 |
|---|
| Symbol | |
|---|
| ID | 4432605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 127705 |
|---|
| End bp | 128250 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639665948 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_808187 |
|---|
| Protein GI | 116510971 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC GTGAAAAAAT ATTAAAGAAG ACAGAAGAAT TTATCCTAAA AAATGGAATT
GAAAAGTTGA CCATTTCAAA AATTGCCAAA GAATTGAATA TTAGTCAGCC AGCGATTTAT
AAACATTTTA AAAGTAAAGA TGAACTTTTG ACCATTCTAT CACTTCGTTG GCTTAATGGT
CAGACGCTTG TCAAAATTTT TCCTTTTGAT ACAAGTTCTT ATGAGCATCA AAAAGATATT
GTCCATGATT GGCTTTGGTC AGTAGCTATT GCCAAGTATG AAGCCCACAG AAATACACCA
GAAATGTTTG CTCTATATAC TACTTATATT GGTGAGAACT TAGAATTAGG ACGCCAACAT
ATTTTAGAAA TGGTAGAGAG TTTAAAAACG GCGGCTAAAC TAGAATCTTA TGAGGAGGCT
GGCGCTTATA TCCAAGCTTT CGTTTATTTT CACCACCCAA AAATTGCCCC TCAGTGGGAC
GATCAATTTC AAACGCAATT TGAAAATCTC TGGACTTTGG TGGAACCAAA TTTAAATGAA
TTTTAA
|
|---|
| Protein sequence | MNTREKILKK TEEFILKNGI EKLTISKIAK ELNISQPAIY KHFKSKDELL TILSLRWLNG
QTLVKIFPFD TSSYEHQKDI VHDWLWSVAI AKYEAHRNTP EMFALYTTYI GENLELGRQH
ILEMVESLKT AAKLESYEEA GAYIQAFVYF HHPKIAPQWD DQFQTQFENL WTLVEPNLNE
F
|
|---|
| |