Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0143 |
Symbol | |
ID | 4432604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 126801 |
End bp | 127586 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639665947 |
Product | Short-chain dehydrogenase (D-alanine transfer protein) |
Protein accession | YP_808186 |
Protein GI | 116510970 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATTTA CAGGACATAC CATTTTAATC ACAGGCGGTA CAAGCGGGAT TGGTCTAGGT TTTGCAAAAA AATTTGCTGA ATTAGGAAAT AAAGTTATCA TCACTGCACG CAATGAAGAT AGACTCAATC AAATTTTAAG CGAAAATCCA ACTTTTTCAG GATTTGTCAG TGATGTTGCT GACGAAAATT CTCTGTCCCA ATTGGTCAAT TTCATCAATG AAAATTCCCC TAAGCTTGAC CTTCTCATGA ATTGTGCCGG AATTATGCGT GCCATCAATT TGTTTGAACA AGCTGACAAT TCTCTAGGAG CACTGACAGA AGAAATTAAT ATTAACTTAC TAGGAACTAT TGCTGTCACA CAAGCCTTTT TGGAAGTTCT TGTAGCAAAT AATGGGATGG TCATTAACGT TTCATCTGGC TTATCAAATC TGGCTGACGG TGCGCATCCT ATTTACAATT TAACCAAAGC TAGTGTTCAT TTTTACTCTG ATGCCCTTCG AGAACAAGCC AAATATTTTG ATAAATCTTT AAAGGTTGTA GAATTAGTTC CACCATTAGT TGCCGAAACA AATCTTGAAA GCCATACAAA TACTGACGCA CCTAATAACA TGGCCCTTTC GGATTTGATT AATGAAACTT TAGCCGGACT TGAAAATGGC TTAGAGCGAA TTGATGCTGG TTTTTCCAAA CAGCTTCACC AAATGGGAAA AGTTAATAGT GACGAAAACA CCAAACTTCT CTCTAATCAA ATGCTCAGTA ACTATTTTCC AAAAAACAAA GAATAA
|
Protein sequence | MTFTGHTILI TGGTSGIGLG FAKKFAELGN KVIITARNED RLNQILSENP TFSGFVSDVA DENSLSQLVN FINENSPKLD LLMNCAGIMR AINLFEQADN SLGALTEEIN INLLGTIAVT QAFLEVLVAN NGMVINVSSG LSNLADGAHP IYNLTKASVH FYSDALREQA KYFDKSLKVV ELVPPLVAET NLESHTNTDA PNNMALSDLI NETLAGLENG LERIDAGFSK QLHQMGKVNS DENTKLLSNQ MLSNYFPKNK E
|
| |