Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0101 |
Symbol | secA |
ID | 4432501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 93327 |
End bp | 95924 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639665907 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_808148 |
Protein GI | 116510932 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.17444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAATA TTATTAGAAA ACTTGTCGAA AACGACAAAA AAGAGCTCAA AAAACTCAAT AAAATGGCGC TCCAAGTTGA AAGTTTCGCT GATGAAATGG AACACTTGAC AGATGAGCAG TTAAAAGCCA AAACTCCAGA ATTGAAAGAA CGTATTGCAA AAGGAGAAAG TCTTGATGAC CTCCTCTATG AAGCTTTTGC CGTTTGTCGT GAAGCAGCTC GTCGTGTGCT TGGATTGTAT CCTTTCCATG TTCAAATCAT GGGTGGGATT GTCTTGCATA ATGGGGACGT TCCTGAAATG CGTACTGGTG AAGGTAAAAC CTTGACTGCA ACAATGCCTG TTTATCTTAA TGCTTTATCA GGCAAAGGGG TTCACGTTGT TACTGTCAAT GAATACTTGG CAACTCGTGA TATGACTGAA ATGGGTGAGC TTTATAGTTG GCTCGGTTTA ACTGTTGGTT TGAACTTGAA CTCAAAATCA CCAGAAGAAA AACGTGAAGC TTATAACTGT GATATTACTT ATTCAACATC AGCTGAGCTT GGCTTTGACT ATCTTCGAGA TAATATGGTT ACTCGTGCTG TAGATATGGT TCAAAAACCA CTTAACTATG CACTTGTCGA TGAAGTAGAC TCAATTTTGG TCGATGAAGC TCGGACTCCT TTGATTATTT CTGGACAAGC CGAAAGTTCA TCAGCACTTT ACTATCGCGC TGACCAATTT ACTAAGACTT TAAAAGGTCA AAACTTGAAC GTTGCAACTT CTGATTACGA AGAGGGCGAT GATTACAAGA TTGACTTACA ATCAAAAACA ATTTCTTTAA CTGAAGAAGG AATTGATAAG GCTGAAAAAT TCTTCCAAAT CGAAAATCTT TATGATATGG AAAATGTTGC CTTGACTCAC TTTGTTGACA ATGCTTTGCG TGCCAACTTT ATCATGCTTC ATGACATTGA CTATATGGTT GATGAGAATC AAGAAGTCTT GATTATTGAC CAATTTACAG GACGTACGAT GCCTGGTCGT CGTTATTCTG ATGGTCTTCA CCAAGCAATT GAAGCTAAAG AAGCTGTGCC AATTCAAGAT GAATCAAAAA CAATGGCTTC AATTACCATC CAAAACTACT TCCGGATGTA TAAAAAATTG TCAGGGATGA CAGGTACGGC TAAAACAGAA GAAGAAGAAT TCCGTGAGAT TTATAATATT CAAATCACAC CAATTCCAAC CAACCGTCCA GTTCAACGTT TAGACCATCC AGATTTGCTT TACCCAACTT TGGAAGCTAA ATTTAAAGCA GTTATTGATG ATATTAAACG TCGTCATGCT GAAGGTCAAC CGATTTTGAT TGGTACTGTT GCTGTAGAAA CTTCAGAATT GATTTCTAAG AAGTTGGTTG AAGCGAAAAT TCCTCATGAA GTTTTGAACG CGAAAAATCA CTTCCGTGAA GCACAAATCA TCATGAATGC GGGTCAACAA GGAGCAGTAA CGATTGCGAC CAACATGGCC GGTCGTGGGA CTGATATCAA GCTTGGGCCT GGTGTAATTG ATCATGCAGA TCCTGAATTC CGCGGACTTG CTGTTATTGG TACCGAACGT CATGAATCTC GTCGTATTGA TAACCAATTG CGTGGTCGTT CTGGACGTCA AGGTGACCCA GGGGTTTCAC AATTCTATCT CTCTCTTGAA GATGAATTAA TGAAACGTTT TGGTTCTGAA CGTGTTTCAG CTTTCCTAGA TAGAATGCGT ATTTCTGGTG AAGATGCTGT TATCAAATCT GGGCTGATTA CTCGTCAGAT TGAAAGTTCA CAAAAACGTG TCGAAGGAAA TAACTATGAT TCTCGGAAAC AAGTCTTGCA ATATGATGAC GTAATCCGTG AGCAACGTGA AGTAATTTAT GCGCAACGTC AAGAAGTTAT CTTGACTAAA GAAGATATGA CTCCTGTTTT GATGGGAATG TTCAAACGGA CAATTGACCG TCAGGTTGAT GGTCATGAAC TTGCAGGGAA TCTTAAAGAC GAAGAAACAG TCAAAGATCT CTTACAAACA GTGCAAAACA CAATGTTGCC AGAAGAGGCA ATTGAATTAT CTGAATTGAC TGGTCTGTCA GGACAAGCAA TGAAAGATTT GATTTTTGAT AAAGTCAAAA GTCGTTATGC TTCACAGATG GAAAAATTAG CTGACCCAGA ACGTCAGTTA GAATTCCAAC GTGCGGTTAT CTTGCGTGTG GTTGATAATA ACTGGTCAGA ACATATTGAT GCTCTTGACC AAATGCGTCA ATCAGTCGGA CTTCGTGGTT ATGCCCAAAA TAATCCGATT GTTGAGTATC AAGAAGAATC ATATAAAATG TACAATAATA TGATTGGTGC GATTGAATTT GAAGTCACTC GTTTGATGAT GAAAGCACAA ATTCAACCAC AAACGGCAAT CCGTCAGGAA GCGCCAAGAA TGACAACGAC AGCTTCACAA GAAAACATTA CAAATGTCGG CCCTGACACT TCGGTCAGTG AAGAAATTTC ATTTGAAAAT GTTGGACGTA ATGACCCTTG CCCATGCGGC TCTGGTAAGA AGTTTAAAAA TTGTCATGGA CGTACACACA TTGCCTAA
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Protein sequence | MPNIIRKLVE NDKKELKKLN KMALQVESFA DEMEHLTDEQ LKAKTPELKE RIAKGESLDD LLYEAFAVCR EAARRVLGLY PFHVQIMGGI VLHNGDVPEM RTGEGKTLTA TMPVYLNALS GKGVHVVTVN EYLATRDMTE MGELYSWLGL TVGLNLNSKS PEEKREAYNC DITYSTSAEL GFDYLRDNMV TRAVDMVQKP LNYALVDEVD SILVDEARTP LIISGQAESS SALYYRADQF TKTLKGQNLN VATSDYEEGD DYKIDLQSKT ISLTEEGIDK AEKFFQIENL YDMENVALTH FVDNALRANF IMLHDIDYMV DENQEVLIID QFTGRTMPGR RYSDGLHQAI EAKEAVPIQD ESKTMASITI QNYFRMYKKL SGMTGTAKTE EEEFREIYNI QITPIPTNRP VQRLDHPDLL YPTLEAKFKA VIDDIKRRHA EGQPILIGTV AVETSELISK KLVEAKIPHE VLNAKNHFRE AQIIMNAGQQ GAVTIATNMA GRGTDIKLGP GVIDHADPEF RGLAVIGTER HESRRIDNQL RGRSGRQGDP GVSQFYLSLE DELMKRFGSE RVSAFLDRMR ISGEDAVIKS GLITRQIESS QKRVEGNNYD SRKQVLQYDD VIREQREVIY AQRQEVILTK EDMTPVLMGM FKRTIDRQVD GHELAGNLKD EETVKDLLQT VQNTMLPEEA IELSELTGLS GQAMKDLIFD KVKSRYASQM EKLADPERQL EFQRAVILRV VDNNWSEHID ALDQMRQSVG LRGYAQNNPI VEYQEESYKM YNNMIGAIEF EVTRLMMKAQ IQPQTAIRQE APRMTTTASQ ENITNVGPDT SVSEEISFEN VGRNDPCPCG SGKKFKNCHG RTHIA
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