| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0095 |
|---|
| Symbol | |
|---|
| ID | 4433455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 87830 |
|---|
| End bp | 88834 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639665902 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_808143 |
|---|
| Protein GI | 116510927 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3548] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.320202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAA GATTGCAAAA GAGTAGAGTT AAAAAACAAG CTCCTGCTCG CTCTGTCAGT
AAAACCAAAA CTTTTCAAAG CTTAAAAAAA TCTGAGCAGT CTGACCAAGT GGGGGAAATT
TGGCAAAATA ATATTATTCA ATCGCTTGAT GAAGATTATT CAAAAGAACA GGCCAGAAAA
CAGCAAAATA AAAAGATGAC TGAGCGTCAG AAACGAAAAA TTGAGGAAAT GCAAAGCAAT
CCGGAGATGA TTCAAGCGCG TGAAGAACTT AAAGAAGAGT TTCTCAATAC GCATCCTCAA
TATGCAAAAA TGACCAGTGA GGAATTGCAA GAATCAATGA CCAGGCATGC TTTAGAGGAT
GAAAAACTCA GAAAACAAAA ATTACGTCAT CACATTGAAG CATTTGCTGA CGGAATTATT
GCGGTCATCA TTACAATTAT GCTTCTTGAA ATTCTAGTGC CTTCTGGTAA TCAAGGTTAT
TGGGGATTTC TGAGTTCTGC CGGTATTTTT CTGGTGAGTT TTGTTGTTAC TGCTAATTTT
TGGTTCAATC GTCACAAGAT TTTTGCACTG ACAGAAGAAA TTACGGAAAA AATCATTGTT
CAAGATTTTA TCTTTATCGG CTTACTTTCA CTCATCCCAC TTTTGACCAA GTGGATTATG
GTTGCTCCAA CTTCATTTAG TGCTTTTAAT TTTGGTTTGG TTTTGATTGT AATTTTACTT
CAGCAAGAAC TTTTAAGTTA TTCGATTACT AAAGATCATT TTCGTAAGAT GCCAAAATCT
TTTAAATTTT GGCGTCGTGT CTGGACAATC CGACTATTTT CAACAATTCT AATGAATATT
GCAATCATGA TAATTGCCAT TATTTTTCCA TTTTATGGTC ATTGGCTCTT TGTGATTGTT
CCGGTTTTTA ACTTTTTATT CCGCATGGTC AATGACCGAA ATCAGGAAGA AGAAGTTTAT
GCTGCGACAC GTTCTATCGG TGTTCCCTAT TTGAAAGAAG GTTAA
|
|---|
| Protein sequence | MPKRLQKSRV KKQAPARSVS KTKTFQSLKK SEQSDQVGEI WQNNIIQSLD EDYSKEQARK
QQNKKMTERQ KRKIEEMQSN PEMIQAREEL KEEFLNTHPQ YAKMTSEELQ ESMTRHALED
EKLRKQKLRH HIEAFADGII AVIITIMLLE ILVPSGNQGY WGFLSSAGIF LVSFVVTANF
WFNRHKIFAL TEEITEKIIV QDFIFIGLLS LIPLLTKWIM VAPTSFSAFN FGLVLIVILL
QQELLSYSIT KDHFRKMPKS FKFWRRVWTI RLFSTILMNI AIMIIAIIFP FYGHWLFVIV
PVFNFLFRMV NDRNQEEEVY AATRSIGVPY LKEG
|
|---|
| |