Gene LACR_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0090 
Symbol 
ID4433450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp82014 
End bp82766 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content38% 
IMG OID639665898 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_808139 
Protein GI116510923 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACC AATATTTTGT ATTTAAAGAA TTACCAAAAA TCGGTGAAAA ATTTACCATT 
GAAAACCAAG CAGCAGCTCA CCATATTTTT ACGGTCATGC GGGCACAGGC CGGTGATCAG
TTACGCTTAG TTTTTGAAGA GGGGAAAATT GGCCTGTCAG AAATTATTTC GCCAGCTGAC
CAGTCGGTCA GACTGATTGA ATTACTGACA GATTCATCAG AATTACCTGT CCAAGTCACA
GTTGCAGTTG GTTTTCCTAA AGGTGATAAA TTAGATTTTA TTGTTGAAAA ATCAACTGAA
TTAGGCGCCA CAGCCATTTG GTCAGCACCT TTTAAAGCTT CTGTCAGTAA ATGGGACCAC
AAAAAACTGA CAAAAAAACA AGAAAAATTG GAAAAAGTTG CTCTAGGAGC CGCCGAGCAA
TCTCGCAGAC AATTGATTCC TAAAATTCAA TTATTTGACC AATTTTCTAG ATTGACAGAG
CAATTTTCTG ATTTTGACCA GGTTCTTGTA GCCTATGAAG AGTCGGCAAA AATGGGCGAA
ACATCAATGT TTAAACAAGC ACTGACCGAG CTGTCAGCAA ATCAAAAAGT CCTGATTATT
TTTGGGCCAG AAGGTGGAAT TAGTCCTGAT GAAATTGCAA AATTTGAGAA TCTAGGGGCA
AAAATGATTG GCTTAGGACC ACGAATATTG CGAGCAGAAA CAGCTCCCTT ATACGCTTTA
TCAAGTATAT CAGCTTATTT TGAATTATTA TAA
 
Protein sequence
MANQYFVFKE LPKIGEKFTI ENQAAAHHIF TVMRAQAGDQ LRLVFEEGKI GLSEIISPAD 
QSVRLIELLT DSSELPVQVT VAVGFPKGDK LDFIVEKSTE LGATAIWSAP FKASVSKWDH
KKLTKKQEKL EKVALGAAEQ SRRQLIPKIQ LFDQFSRLTE QFSDFDQVLV AYEESAKMGE
TSMFKQALTE LSANQKVLII FGPEGGISPD EIAKFENLGA KMIGLGPRIL RAETAPLYAL
SSISAYFELL