Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0090 |
Symbol | |
ID | 4433450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 82014 |
End bp | 82766 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639665898 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_808139 |
Protein GI | 116510923 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACC AATATTTTGT ATTTAAAGAA TTACCAAAAA TCGGTGAAAA ATTTACCATT GAAAACCAAG CAGCAGCTCA CCATATTTTT ACGGTCATGC GGGCACAGGC CGGTGATCAG TTACGCTTAG TTTTTGAAGA GGGGAAAATT GGCCTGTCAG AAATTATTTC GCCAGCTGAC CAGTCGGTCA GACTGATTGA ATTACTGACA GATTCATCAG AATTACCTGT CCAAGTCACA GTTGCAGTTG GTTTTCCTAA AGGTGATAAA TTAGATTTTA TTGTTGAAAA ATCAACTGAA TTAGGCGCCA CAGCCATTTG GTCAGCACCT TTTAAAGCTT CTGTCAGTAA ATGGGACCAC AAAAAACTGA CAAAAAAACA AGAAAAATTG GAAAAAGTTG CTCTAGGAGC CGCCGAGCAA TCTCGCAGAC AATTGATTCC TAAAATTCAA TTATTTGACC AATTTTCTAG ATTGACAGAG CAATTTTCTG ATTTTGACCA GGTTCTTGTA GCCTATGAAG AGTCGGCAAA AATGGGCGAA ACATCAATGT TTAAACAAGC ACTGACCGAG CTGTCAGCAA ATCAAAAAGT CCTGATTATT TTTGGGCCAG AAGGTGGAAT TAGTCCTGAT GAAATTGCAA AATTTGAGAA TCTAGGGGCA AAAATGATTG GCTTAGGACC ACGAATATTG CGAGCAGAAA CAGCTCCCTT ATACGCTTTA TCAAGTATAT CAGCTTATTT TGAATTATTA TAA
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Protein sequence | MANQYFVFKE LPKIGEKFTI ENQAAAHHIF TVMRAQAGDQ LRLVFEEGKI GLSEIISPAD QSVRLIELLT DSSELPVQVT VAVGFPKGDK LDFIVEKSTE LGATAIWSAP FKASVSKWDH KKLTKKQEKL EKVALGAAEQ SRRQLIPKIQ LFDQFSRLTE QFSDFDQVLV AYEESAKMGE TSMFKQALTE LSANQKVLII FGPEGGISPD EIAKFENLGA KMIGLGPRIL RAETAPLYAL SSISAYFELL
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