| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0085 |
|---|
| Symbol | |
|---|
| ID | 4433445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 77767 |
|---|
| End bp | 79320 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639665893 |
|---|
| Product | ABC transporter ATPase |
|---|
| Protein accession | YP_808134 |
|---|
| Protein GI | 116510918 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT TAAATGTAAA AAATCTATCC CACGGTTTTG GTGACCGTGC CATTTTTGAA
GATGTGAGTT TCCGTTTGCT TAAAGGCGAG CATATCGGTT TTGTTGGGGC AAATGGTGAG
GGTAAATCGA CTTTTATGAA TATCATCACA GGAACGTTGG TTCCTGATGA GGGAAAAGTC
ATCTGGTCGA AAAAGCACCG TGTAGGCTAC ATGGACCAGC ATGCGGCACT TGGAAAAGGT
AAAACAACCC GTGAAGCACT AGCTGAGGCC TTTCAATATC TTTTTGATAT TGAGGAAGAA
ATCAATGATA CTTACCTGAA AATGGCAGAA ATGTCAGAAG ATGAAATGAA TGCAGCACTT
GAAAATGTCG GAGAACTTCA AGAAGAATTA GATAATAGTG ATTTTTATCT GATTGATGCA
AAAGTTGAAG AAACGGCTCG AGGTCTTGGT TTAACGCCAC TTTTAGATAA AGATGTGGCC
GAACTTTCTG GTGGGCAAAG AACGAAAATC TTGCTTGGTA AACTCTTGCT TGAAAAACCT
GACATTTTGC TTTTGGACGA ACCAACGAAC TATTTGGATG AAGAACATAT CTTATGGTTG
AAAAATTATC TGAAAAACTA TGAGAATGCT TTTATTTTAA TTTCGCATGA TGTGCCTTTT
ATGGACGAAG TGGTCAATAT TATTTATCAT GTGCATGGTC TTGGGATTAC GCGTTATTCA
ATGGGTTATG CAGAATTTGA ACGGGTATTT GAAGAGAAAA AAGCGCAACT TGAAGCTTTG
CATAATGCAC AGGTGGCTGA ACAAGCTAAG CTCAAAGATT TCATTGCTCG TAAAAAAGCG
AATGTGGCAA CTTCTGGACA AGCGAAAGCT CGTGAGAAAA AATTGGCGAA AATGGAAATC
GTTGAAACGA TTTCTGAAAA ACCAAAACCA CAATTTGACT TTAAATTTAG CCGTAAACCA
AGTCGTCTGA TTTTTGAAGC TAAAGATTTA GTCATTGGTT ATAACGAACC TTTGTCGTCA
GAAATTAATT TAAAAGTAGA ATCTGGACAA AAAATTGCTT TTATTGGTTC CAACGGGATT
GGGAAATCAA CCTTGCTTAA GAGCTTAATG GGCTTGATTC CAAGTCTTGA TGGGGAAGTT
GAAAAAGGAA ATTTCCAAGA GATTGCTTAT TATGAGCAAG AAATCAAAAA TCCATCGCAA
AAGACAGTTC TTGATGATTT ATGGGACGAA TATCCAAGCT GGAATCAAGC GGAACTCCGC
GGAGCACTGG CACGCGTTGG CTTAACGGCT AAGCAAATTG AATCTCGTGT TTATGTACTC
TCTGGAGGAG AGCAAGCAAA ATTACGTTTT GCTAAATTGA TGAATACAGA ATCAAATATT
CTCATCTTGG ACGAACCGAC TAACCATTTG GACGTGGACG CCAAAGATGA ACTTAAACGC
GCACTTATCG CATATCCAGG AACCGTTTTG ATGGTTTCAC ATGAACCTGA ATTTTATGAA
GGCTTGGTTT CTGATGTCAT TAATTGTGAA GAATGGACGA CACGAATTTT GTAA
|
|---|
| Protein sequence | MSILNVKNLS HGFGDRAIFE DVSFRLLKGE HIGFVGANGE GKSTFMNIIT GTLVPDEGKV
IWSKKHRVGY MDQHAALGKG KTTREALAEA FQYLFDIEEE INDTYLKMAE MSEDEMNAAL
ENVGELQEEL DNSDFYLIDA KVEETARGLG LTPLLDKDVA ELSGGQRTKI LLGKLLLEKP
DILLLDEPTN YLDEEHILWL KNYLKNYENA FILISHDVPF MDEVVNIIYH VHGLGITRYS
MGYAEFERVF EEKKAQLEAL HNAQVAEQAK LKDFIARKKA NVATSGQAKA REKKLAKMEI
VETISEKPKP QFDFKFSRKP SRLIFEAKDL VIGYNEPLSS EINLKVESGQ KIAFIGSNGI
GKSTLLKSLM GLIPSLDGEV EKGNFQEIAY YEQEIKNPSQ KTVLDDLWDE YPSWNQAELR
GALARVGLTA KQIESRVYVL SGGEQAKLRF AKLMNTESNI LILDEPTNHL DVDAKDELKR
ALIAYPGTVL MVSHEPEFYE GLVSDVINCE EWTTRIL
|
|---|
| |