Gene LACR_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0082 
Symbol 
ID4433442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp75306 
End bp76565 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content39% 
IMG OID639665890 
Productrecombination factor protein RarA 
Protein accessionYP_808131 
Protein GI116510915 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACAAA ATCTTGCAAG ACGAATGAGA CCTCGCAATA TCGATGAAAT TGTTGGTCAA 
AGACATTTAG TTGGTAAAGG AAAAATCATC CGCAGAATGG TGGAAACTCA ACTTCTTTCA
AGTATGATTC TCTATGGCCC TCCAGGCATC GGTAAAACTT CAATTGCTTC AGCAATTGCT
GGAACCATGA ACATTGCTTT TAGAACATTT AATGCAACAA CCGATACTAA AAAAAGGCTC
CAAGAAATTG CTTCTGAAGC AGAATTTTCT GGTCAGCTTG TTTTACTTCT TGATGAAATC
CATCGTTTAG ATAAACCAAA ACAAGATTTT CTTTTACCAC TTTTAGAAAA CGGACAAATT
ATATTAATTG GAGCAACGAC CGAAAATCCT TATTTTTCAG TCGTACCCGC CATTCGCTCT
CGTGTTCAAA TTTTTGAACT GAAAGCTCTT GAACCAGAGG ATTTAGAATC TGCTGTAAAC
CTAAGTTTAC AAGATAAAGA ACGAGGATTT GATTTTGATG TGACTATTGA CGATGATGCG
CTCTATTTCT TAGTTCACTC AACCAATGGA GACTTACGTT CTACATTCAA TGCCTTAGAA
TTAGCTGTTC TTTCTTCAAA CGAACACCGC GTTACCCTAG ATGATATGGA AAATTCTTTG
CAAAGAAAAG CAGCAACTTT TGATAAGGAT GGGGATGCTC ATTACGATTT GCTGTCTGCT
CTGCAAAAAT CAATTCGTGG ATCTGATGTC AATGCAAGTT TACACTATGC TGCACGTTTG
ATTGAGGGAG GGGACTTACA AAGTCTAGCA CGTCGTTTGA CTGTCATGGC CTATGAAGAT
ATTGGTTTAG CCAACCCCGA TGCTGCAGTA CATACCGTTA CAGCCTTATC AGCAGCTGAG
AAATTAGGGT TCCCAGAGGC ACGGATTCCT CTTGCCAATA TCATTATTGA TTTGGCCTTA
TCTCCAAAAT CAAACTCAGC TTATTTAGCA ATGGACGAAG CCCTTTCGGA CTTGGGAAAA
TACGGAAATC TTGCTGTGCC CTCGCATTTA CAAGATGGTC ATTACGCCGG AGCTAAAGAA
TTAGGACGGT CTGTAGAATA TCAATATGCT CATAATTTCC CAGACCACTG GGTAAATCAA
CAATATTTAC CAGATAAAAT TAAAAATGCA GATTACTTCC GACCGGATGA TATGGGGAGA
TATGAAAAAG CCCTCCATAG TCGGAAAGAA TGGATTAATG AACAAAAAAA GAGGAGCTGA
 
Protein sequence
MVQNLARRMR PRNIDEIVGQ RHLVGKGKII RRMVETQLLS SMILYGPPGI GKTSIASAIA 
GTMNIAFRTF NATTDTKKRL QEIASEAEFS GQLVLLLDEI HRLDKPKQDF LLPLLENGQI
ILIGATTENP YFSVVPAIRS RVQIFELKAL EPEDLESAVN LSLQDKERGF DFDVTIDDDA
LYFLVHSTNG DLRSTFNALE LAVLSSNEHR VTLDDMENSL QRKAATFDKD GDAHYDLLSA
LQKSIRGSDV NASLHYAARL IEGGDLQSLA RRLTVMAYED IGLANPDAAV HTVTALSAAE
KLGFPEARIP LANIIIDLAL SPKSNSAYLA MDEALSDLGK YGNLAVPSHL QDGHYAGAKE
LGRSVEYQYA HNFPDHWVNQ QYLPDKIKNA DYFRPDDMGR YEKALHSRKE WINEQKKRS