Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0071 |
Symbol | |
ID | 4432973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 67560 |
End bp | 68027 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639665879 |
Product | universal stress protein UspA-like nucleotide-binding protein |
Protein accession | YP_808120 |
Protein GI | 116510904 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000663876 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA ATTATAAAAA AATTCTAATC GCTATTGATG GTTCTGAACA GGCAGAAGCA GCATTAAAAG AAGCAATCAC TCTTTGTAAA AGAGATAATG CTCAATTATT TGTTTTACAT GCAACGGATA AAAATAGTAT CTATGCAGCT GGGAACCCAG TACCTGTGGT TCCGGCCCCT GCTATTCCAG TAGTTCCTGC AGTTCCTGTT CTTGAAGAAA GTGCAGACAA TGAAGCTAAG GAAGTTTTAG AGAAAGCTTC AGCAATTATC AACAATGAAG TGAAATTTGA AGAAATTCGT GTCGATGGTT CTGCTAAAAA TGAAATTGTA GACTTTGCCA AAGAACATGA AATTGATATG ATTGTAATGG GCTCATCTGG TAAAGGTGCC CTTGATCGAA TGTTACTTGG TTCTACTGCA GTTTATGTAG TTAAACATGC ACCTTGTAGC GTTACAATCA TCAAATAA
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Protein sequence | MSKNYKKILI AIDGSEQAEA ALKEAITLCK RDNAQLFVLH ATDKNSIYAA GNPVPVVPAP AIPVVPAVPV LEESADNEAK EVLEKASAII NNEVKFEEIR VDGSAKNEIV DFAKEHEIDM IVMGSSGKGA LDRMLLGSTA VYVVKHAPCS VTIIK
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