Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0062 |
Symbol | |
ID | 4434649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 57506 |
End bp | 58318 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639665870 |
Product | HAD superfamily hydrolase |
Protein accession | YP_808111 |
Protein GI | 116510895 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA ACTTAAAACT TTTTGCTACA GATATGGACG GAACTTTTCT GCGCAATGAC CATTCTTATA ATCACAAAAA ACTTGCGGAA CTAATTAAAG AAATTCAAGA TAGAAATCTT CTTTTTGCCG CTTCTTCTGG CCGTTCTTTA CTTGGTTTAA CAGAAGTTTT TGCTGAATAT AAAGACCAGA TGGCTTTTGT CGCCGAAAAC GGTGGCGTTG TTGCTTATAA AGGAGAAATC CTCTTTGCCA AAAATTTGAC TGTTGCCCAA ACGCAAGAAT TGATTGATGA CTTGCAAGAA ATGCCATTCA GTCCTAAAAG TGATTATCTG ATTTCTGGTC TCAAAGGGGC ATATTACCCC GAAGGAATTT CTAAAGAATA CCTGACTCAT GCCAAACTTT ACTATCCTAA CTGTCAACTT TATCACCAAT TAGATGAAAT TGATGACAAA CTTCTCAAGG TTACCACAAA CTTTCCTGAG GACCATGTTC GGGACTGTGA GCAATGGATT ACTGACCGTC TTTCTTTTGT CAGAGCGACA ACGACTGGTT TTACTAGTAT TGATATCGTA CCAAATGGAA TTTCTAAAGC CTCAGGTCTG GCACATTTGT TGGCACATTT TAATTGGCTC CCTGAAAATT TAGCTGTTTT TGGTGACCAA ATGAATGATT TGGAAATGTT TGAATACGCT GGTTCTTCTT TTGCTGTCAG CAACGCAGCC CCTGAAATTC TTGCTCAGGC TGACAAAGTC ATTCTTTCTA ATGACGAAGA TGCTGTCCTT GTTGAAATTG AAAATATTTT AAATGAGCAG TAA
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Protein sequence | MTKNLKLFAT DMDGTFLRND HSYNHKKLAE LIKEIQDRNL LFAASSGRSL LGLTEVFAEY KDQMAFVAEN GGVVAYKGEI LFAKNLTVAQ TQELIDDLQE MPFSPKSDYL ISGLKGAYYP EGISKEYLTH AKLYYPNCQL YHQLDEIDDK LLKVTTNFPE DHVRDCEQWI TDRLSFVRAT TTGFTSIDIV PNGISKASGL AHLLAHFNWL PENLAVFGDQ MNDLEMFEYA GSSFAVSNAA PEILAQADKV ILSNDEDAVL VEIENILNEQ
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