Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0060 |
Symbol | |
ID | 4434647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 55016 |
End bp | 56329 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639665868 |
Product | amino acid transporter |
Protein accession | YP_808109 |
Protein GI | 116510893 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.490002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA ATAAATTATT ATCACCGGCT GCCATTTTTT TGTTGGGAGT GAATTCCATA ATTGGCTCAG GTATTTTCTT ACTTTCTGGA AAAATATATG AAGACGCTGG GATTTGGAGC TTGCTAGCCA TTTTATTTGC TGGTCTATCC ATTTTTGTAA TTGCTTTTGC TTATGCAAAT ATGAGTAAGA TTTACTCAAA AAATGGTGGA GGTCTTGTCT ATGCCAAAGA AACATTTGGG CGCTTTCCGG GTTTTATTGT TGGAATGGTG ACTTGGTTAT TGGGGACAGT GACATTGACA ACGGAAGTTT CAGCCTTGCT CACAGCCTTG AAAATGATTT TACCGAATCT TAATAGTCGA TTAACTGGCT TGATTATTAT TTTAGTTCTG GGCTTGATTT CCTATTTTGG AAGTTCAATT ATTGCTGGTT TAGATAATCT GACCTCATTT GTGAAGATAT TATTGGTTCT TGTTTTTGTT TGTACTTGTT TTTGGTTAGT GCGTGCTGTT AATTTTACAA GTCCACATTT ATTGACTGTC TCATCAGCAA ATTTAGGTGG TTTCAAAGGA TTTTTATCAG CTTATGGAAC AGTTTTCTTC TTTTTTACAG GATTTTCTTT TTTACCGGTC AATGCTGAAA AGATGAAAAA TCCAGCGAAA AATTTACCTA AAATGATGGC ACTTGTGATG CTCACATGCT TAACTGTCTA TTTGATTATT CAAGCAATTA CAATTGGAGC ACTTGGTCCT GAATTGACTA AAACATTGGT TCCAGCGGCA ACGGCTTTTA GTAGAGTTGT AGGGGCAATC GGGATTCCAC TCTTTGTCAT TGGGATTTGT TTTTCAATTT TTGGTGTGAT TGTAGCAACT ACGTTTAATA CACCAACTAT CCTAGCAAGT TTAGCTCAAG CACATGAAGA TGTTCCAATG TTTGTTGCGA AAAATAATCG CTTTGGAACA CCAAGTTGGG CAATTATTTT GACGACACTG TGTGCCATGG GACTTTTTCT AAGTGGCAAC TATGTTTTTC TGAGTGGTTT AACCGTATTT ATGAGTTTTG TTCAATATTT ATCAACCGGT CTTGCCAATA TTAAGAAAAA ATTCCTGTGG ATTGGAATTG GTTCAGTACT TTTTTCTCTT GTTTTACTGA CAAGTTTTAC TTTGTCTGTT CTACTTTTAG GTCTAGGAAT AATAATTTTA TTAGTGATTA TTTATTTTGT AGTCAAATTA GATGATGATG AACGTGAAAA ATGGCTTAAA GAGCATCAAG AAAAATCAAA AGCTGCGGCT GTTAATACTG TTAAGCGTTT ATAA
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Protein sequence | MKENKLLSPA AIFLLGVNSI IGSGIFLLSG KIYEDAGIWS LLAILFAGLS IFVIAFAYAN MSKIYSKNGG GLVYAKETFG RFPGFIVGMV TWLLGTVTLT TEVSALLTAL KMILPNLNSR LTGLIIILVL GLISYFGSSI IAGLDNLTSF VKILLVLVFV CTCFWLVRAV NFTSPHLLTV SSANLGGFKG FLSAYGTVFF FFTGFSFLPV NAEKMKNPAK NLPKMMALVM LTCLTVYLII QAITIGALGP ELTKTLVPAA TAFSRVVGAI GIPLFVIGIC FSIFGVIVAT TFNTPTILAS LAQAHEDVPM FVAKNNRFGT PSWAIILTTL CAMGLFLSGN YVFLSGLTVF MSFVQYLSTG LANIKKKFLW IGIGSVLFSL VLLTSFTLSV LLLGLGIIIL LVIIYFVVKL DDDEREKWLK EHQEKSKAAA VNTVKRL
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