Gene LACR_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0060 
Symbol 
ID4434647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp55016 
End bp56329 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content35% 
IMG OID639665868 
Productamino acid transporter 
Protein accessionYP_808109 
Protein GI116510893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.490002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATAAATTATT ATCACCGGCT GCCATTTTTT TGTTGGGAGT GAATTCCATA 
ATTGGCTCAG GTATTTTCTT ACTTTCTGGA AAAATATATG AAGACGCTGG GATTTGGAGC
TTGCTAGCCA TTTTATTTGC TGGTCTATCC ATTTTTGTAA TTGCTTTTGC TTATGCAAAT
ATGAGTAAGA TTTACTCAAA AAATGGTGGA GGTCTTGTCT ATGCCAAAGA AACATTTGGG
CGCTTTCCGG GTTTTATTGT TGGAATGGTG ACTTGGTTAT TGGGGACAGT GACATTGACA
ACGGAAGTTT CAGCCTTGCT CACAGCCTTG AAAATGATTT TACCGAATCT TAATAGTCGA
TTAACTGGCT TGATTATTAT TTTAGTTCTG GGCTTGATTT CCTATTTTGG AAGTTCAATT
ATTGCTGGTT TAGATAATCT GACCTCATTT GTGAAGATAT TATTGGTTCT TGTTTTTGTT
TGTACTTGTT TTTGGTTAGT GCGTGCTGTT AATTTTACAA GTCCACATTT ATTGACTGTC
TCATCAGCAA ATTTAGGTGG TTTCAAAGGA TTTTTATCAG CTTATGGAAC AGTTTTCTTC
TTTTTTACAG GATTTTCTTT TTTACCGGTC AATGCTGAAA AGATGAAAAA TCCAGCGAAA
AATTTACCTA AAATGATGGC ACTTGTGATG CTCACATGCT TAACTGTCTA TTTGATTATT
CAAGCAATTA CAATTGGAGC ACTTGGTCCT GAATTGACTA AAACATTGGT TCCAGCGGCA
ACGGCTTTTA GTAGAGTTGT AGGGGCAATC GGGATTCCAC TCTTTGTCAT TGGGATTTGT
TTTTCAATTT TTGGTGTGAT TGTAGCAACT ACGTTTAATA CACCAACTAT CCTAGCAAGT
TTAGCTCAAG CACATGAAGA TGTTCCAATG TTTGTTGCGA AAAATAATCG CTTTGGAACA
CCAAGTTGGG CAATTATTTT GACGACACTG TGTGCCATGG GACTTTTTCT AAGTGGCAAC
TATGTTTTTC TGAGTGGTTT AACCGTATTT ATGAGTTTTG TTCAATATTT ATCAACCGGT
CTTGCCAATA TTAAGAAAAA ATTCCTGTGG ATTGGAATTG GTTCAGTACT TTTTTCTCTT
GTTTTACTGA CAAGTTTTAC TTTGTCTGTT CTACTTTTAG GTCTAGGAAT AATAATTTTA
TTAGTGATTA TTTATTTTGT AGTCAAATTA GATGATGATG AACGTGAAAA ATGGCTTAAA
GAGCATCAAG AAAAATCAAA AGCTGCGGCT GTTAATACTG TTAAGCGTTT ATAA
 
Protein sequence
MKENKLLSPA AIFLLGVNSI IGSGIFLLSG KIYEDAGIWS LLAILFAGLS IFVIAFAYAN 
MSKIYSKNGG GLVYAKETFG RFPGFIVGMV TWLLGTVTLT TEVSALLTAL KMILPNLNSR
LTGLIIILVL GLISYFGSSI IAGLDNLTSF VKILLVLVFV CTCFWLVRAV NFTSPHLLTV
SSANLGGFKG FLSAYGTVFF FFTGFSFLPV NAEKMKNPAK NLPKMMALVM LTCLTVYLII
QAITIGALGP ELTKTLVPAA TAFSRVVGAI GIPLFVIGIC FSIFGVIVAT TFNTPTILAS
LAQAHEDVPM FVAKNNRFGT PSWAIILTTL CAMGLFLSGN YVFLSGLTVF MSFVQYLSTG
LANIKKKFLW IGIGSVLFSL VLLTSFTLSV LLLGLGIIIL LVIIYFVVKL DDDEREKWLK
EHQEKSKAAA VNTVKRL