Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0038 |
Symbol | |
ID | 4433619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 35769 |
End bp | 36623 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639665847 |
Product | transposase |
Protein accession | YP_808089 |
Protein GI | 116510873 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGCTG CGGATATGGC TCAAACCATA CAAACTTTAG CACTCAATGT CAGACTAAGC TGTCAACTCC TTGATGTTCC TGAATCAAGT TATTATCAAC GGATTAACCG ACATCCATCT AAAACTCAAT TAAGGAGACA ATACCTGTCA CTCAAAATTT CTCAACTCTT CAATGCTAAC CGAGAAATCT ATGGTGCTCC TAAAATTCAT CATCTTCTAC TTAAACAAGG GGAAAAAGTC GGGTTAAAAC TGGTACAGAA GCTAATGAAG CAACTTCAAC TCAAGTCTGT AGTCATTAAG AAATTTAAGC CTGGATACTC ACTAAGTGAT CACATCAATC GAAAAAATCT CATACAGACT GAACCTACAA AGAAGAATAA GGTTTGGTCA ACCGACATTA CTTATATTCC TACTCAACAA GGATGGGCTT ATCTCTCAAC CATTATGGAT CGTTATACTA AAAAAGTCAT TGCTTGGGAT TTGGGCAAGC GAATGACTGT AGAATTAGTG CAAAGAACTT TAAATAAGGC CATTAAATCA CAAGACTATC CAGAAGCTGT TATTCTTCAT TCTGACCAAG GAAGCCAGTA TACGAGTCTA GAGTATGAAG AGTTGCTTAA GTATTATGGG ATGACTCACT CTTTCAGTCG AAGGGGATAC CCTTATCATA ATGCCAGTCT TGAATCTTGG CATGGACATT TAAAAAGAGA GTGGGTGTAT CAATTTAAAT ATAAGAACTT TGAAGAAGCC TATCAGAGTA TTTTCTGGTA CATCGAAGCC TTTTATAATT CAAAACGAAT CCATCAAAGT TTAGGGTATC TTACACCTAA TCAATTTGAA AAGGTAAGTG CTTAA
|
Protein sequence | MSAADMAQTI QTLALNVRLS CQLLDVPESS YYQRINRHPS KTQLRRQYLS LKISQLFNAN REIYGAPKIH HLLLKQGEKV GLKLVQKLMK QLQLKSVVIK KFKPGYSLSD HINRKNLIQT EPTKKNKVWS TDITYIPTQQ GWAYLSTIMD RYTKKVIAWD LGKRMTVELV QRTLNKAIKS QDYPEAVILH SDQGSQYTSL EYEELLKYYG MTHSFSRRGY PYHNASLESW HGHLKREWVY QFKYKNFEEA YQSIFWYIEA FYNSKRIHQS LGYLTPNQFE KVSA
|
| |