Gene LACR_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0030 
Symbol 
ID4433611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp30480 
End bp31646 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content35% 
IMG OID639665839 
Productmannitol-1-phosphate 5-dehydrogenase 
Protein accessionYP_808081 
Protein GI116510865 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CAGTACATTT TGGTGCAGGA AATATTGGTC GTGGTTTTAT TGGGGAAATT 
CTAAGTAAAA ATGGCTTTGA GATTTACTTC GTTGACACGA ATAAGGCGAT AATTGATGAA
CTTAATACTC GTCATTCTTA TGAAATTGGT ATCGCAAGTA GTAGTCCTGA AAAAATTTCT
GTTTCAGGAC TATTTGGGAT TAACAATGGT GAAAATCCTG AGGATGTAAT TGAGGCAATT
GCTCAAGCTG ATATAGTAAC GAAAGCAATT GGACCAAATA TTTTGCCTTA TATTGCTGAG
CTCGTTGCCA AAGGTATTCA AAAACGTAAA GAAGAGAATA AGCAAGTCCA AATAGATATT
ATTGCTTGTG AAAATATGAT TGGGGGCTCA GAGTTTTTAG AAAAGAAGGT GGCTGAATAT
TTATCAGACT CTGATAAAGT TTACCTTGCA AACTACATAG GGTTTCCCAA TGCTGCCGTT
GACCGCATTG TACCTGGTCA AAAGCATGAA GATCTTCTTT ATGTTGAAGT AGAGCCCTTT
TGTGAGTGGG TGATTGACGA GAGTCAGATA AAAAATAAAA GTTTTAAACT TGAAGGCGTT
CATTATGCCA ATAATCTTGA ACCTTTCATA GAGCGTAAAC TTTTCTCTGT AAACTCAGGA
CACGCTACAG TCGCTTATTC TAGCGCATAT AAAGGTTATA AAATAATTTT GGAAGGTTTA
CAGCACAAAG AGATTTTAAG TGCTTTAAAG GGTGTACAGA AAGAAACACG CGCTTTACTT
TTAGCCAAAT GGCCCCAATA TTTTACGGAA GAAGATTTGA TGAGCTATCA TCAAATGATT
ATCTCTCGCT TTGCTAATCC AAAAATTATT GATGAGGTGA CGCGGGTTGC ACGAACACCT
ATTCGAAAGT TAGGTTATGA CGAACGCTTT ATTCGCCCTA TTCGTGAATT AAATGAACGT
GGTCTCTCTT ATCAAAATCA TTTAGATATT GTTGGAAAAA TTTTTGCTTA CCAGGATGAA
AATGATAGTC AGTCAGTTCA ACTTCAAGAA AAGCTTAGCA CAATGGATCT TCAAAGGCTT
ATTGAAGAAG TCACTGGCCT ATCAAATAAA AAAATAATTT TGGAAATCGA ACTAGTGATT
AAGAAATATA AAAATGACAG CAAGTAG
 
Protein sequence
MKKAVHFGAG NIGRGFIGEI LSKNGFEIYF VDTNKAIIDE LNTRHSYEIG IASSSPEKIS 
VSGLFGINNG ENPEDVIEAI AQADIVTKAI GPNILPYIAE LVAKGIQKRK EENKQVQIDI
IACENMIGGS EFLEKKVAEY LSDSDKVYLA NYIGFPNAAV DRIVPGQKHE DLLYVEVEPF
CEWVIDESQI KNKSFKLEGV HYANNLEPFI ERKLFSVNSG HATVAYSSAY KGYKIILEGL
QHKEILSALK GVQKETRALL LAKWPQYFTE EDLMSYHQMI ISRFANPKII DEVTRVARTP
IRKLGYDERF IRPIRELNER GLSYQNHLDI VGKIFAYQDE NDSQSVQLQE KLSTMDLQRL
IEEVTGLSNK KIILEIELVI KKYKNDSK