Gene LACR_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0029 
Symbol 
ID4432877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp29900 
End bp30331 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content33% 
IMG OID639665838 
Productmannitol/fructose-specific phosphotransferase system IIA protein 
Protein accessionYP_808080 
Protein GI116510864 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCC AAAAAGATCT TATTAAAATC AATCAAAATT TTTCAAATAA GGAAGAAGCA 
ATTAATTATT GTGGAAAATT GTTGGTTGAT GGAGGATACG TCAACTCAAA TTATGTTTCA 
GCGATGCTTG ATAGAGATAA AGAATTATCG GTTTATATGG GTAATTTTAT TGCGATTCCT 
CATGGGACGG ATTCAGCAAA AAAAGAAGTT TTAAAAACAG GAGTCATAAT TGTCCAAGTT 
CCTCGAGGAG TAAATTTTGG AACAGAAGAA AATCCGAAAC TAGCAACGAT GCTTTTTGGA 
ATCGCAGGAA TAGAAGATGA GCATCTTGAC CTCATTCAAA AAATTTCAAT TTTTTGTGCT 
GACGTTGACA ATGTTGTAAA GCTGGCTGAT GCTCAATCAG TTGAGGAGAT TGCAAAATAC 
TTTGAAAATT AA
 
Protein sequence
MEIQKDLIKI NQNFSNKEEA INYCGKLLVD GGYVNSNYVS AMLDRDKELS VYMGNFIAIP 
HGTDSAKKEV LKTGVIIVQV PRGVNFGTEE NPKLATMLFG IAGIEDEHLD LIQKISIFCA 
DVDNVVKLAD AQSVEEIAKY FEN