Gene LACR_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0006 
Symbol 
ID4432916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp10059 
End bp10616 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content36% 
IMG OID639665815 
ProductXRE family transcriptional regulator 
Protein accessionYP_808065 
Protein GI116510849 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000100303 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGAG AAAATCTACA GAAAGCTCGT CTTTCTAAAA ACCTCACTCA AGAGGAAGTC 
GCAAAAGAAC TATACTTTAG TCGTCAAGCG ATTTCCCGTT GGGAATCTAA CAAAACTGAA
CCAAATCTTG AAACGTTAAT TGCCTTAGCA GAATTATATG ATTCAGATTT ATTGGCTTTT
GCAAAAGGAA TCGAACCTCA AAAACGAAAA AAACATATCA ATCTTTTTGC TGGCTTTGGT
TTGCTATTTT TCAACTTTGT CCTTGGGGTT TGGTTGATTA TTGCTACTGC TCTAATCCTT
TTAGCTTTTT ATGCGATTGT CCTAGCCTTA TTCCTTGCCC CATTTATCAT GATATTTGCT
GTCCTTACTC ATAACCCTCA TATTACCTTT GGAAACGTAA CAGGGGCAAC AGGTTTTAAT
TGGCCTTACT GGGTAATTGC GATTATCGCT TGTTCACTGA TGGTTCTTGT TAGTCCATTT
ATTTGGCGAT TCACAAAATT ACTATATTTT TGGCTCCTTA AATATCTCAA GTTTAATCTC
AAATCAGTTT ATAATTAA
 
Protein sequence
MLGENLQKAR LSKNLTQEEV AKELYFSRQA ISRWESNKTE PNLETLIALA ELYDSDLLAF 
AKGIEPQKRK KHINLFAGFG LLFFNFVLGV WLIIATALIL LAFYAIVLAL FLAPFIMIFA
VLTHNPHITF GNVTGATGFN WPYWVIAIIA CSLMVLVSPF IWRFTKLLYF WLLKYLKFNL
KSVYN