Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0006 |
Symbol | |
ID | 4432916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 10059 |
End bp | 10616 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639665815 |
Product | XRE family transcriptional regulator |
Protein accession | YP_808065 |
Protein GI | 116510849 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000100303 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGGAG AAAATCTACA GAAAGCTCGT CTTTCTAAAA ACCTCACTCA AGAGGAAGTC GCAAAAGAAC TATACTTTAG TCGTCAAGCG ATTTCCCGTT GGGAATCTAA CAAAACTGAA CCAAATCTTG AAACGTTAAT TGCCTTAGCA GAATTATATG ATTCAGATTT ATTGGCTTTT GCAAAAGGAA TCGAACCTCA AAAACGAAAA AAACATATCA ATCTTTTTGC TGGCTTTGGT TTGCTATTTT TCAACTTTGT CCTTGGGGTT TGGTTGATTA TTGCTACTGC TCTAATCCTT TTAGCTTTTT ATGCGATTGT CCTAGCCTTA TTCCTTGCCC CATTTATCAT GATATTTGCT GTCCTTACTC ATAACCCTCA TATTACCTTT GGAAACGTAA CAGGGGCAAC AGGTTTTAAT TGGCCTTACT GGGTAATTGC GATTATCGCT TGTTCACTGA TGGTTCTTGT TAGTCCATTT ATTTGGCGAT TCACAAAATT ACTATATTTT TGGCTCCTTA AATATCTCAA GTTTAATCTC AAATCAGTTT ATAATTAA
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Protein sequence | MLGENLQKAR LSKNLTQEEV AKELYFSRQA ISRWESNKTE PNLETLIALA ELYDSDLLAF AKGIEPQKRK KHINLFAGFG LLFFNFVLGV WLIIATALIL LAFYAIVLAL FLAPFIMIFA VLTHNPHITF GNVTGATGFN WPYWVIAIIA CSLMVLVSPF IWRFTKLLYF WLLKYLKFNL KSVYN
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