| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0003 |
|---|
| Symbol | |
|---|
| ID | 4433305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 2913 |
|---|
| End bp | 6212 |
|---|
| Gene Length | 3300 bp |
|---|
| Protein Length | 1099 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639665812 |
|---|
| Product | DNA helicase/exodeoxyribonuclease V, subunit B |
|---|
| Protein accession | YP_808062 |
|---|
| Protein GI | 116510846 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
|---|
| TIGRFAM ID | [TIGR02774] ATP-dependent nuclease subunit B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT TATATACTGA AATTACACAA GATTTGACGG AGGGATTATT AGAAATTGCT
CTTGAAGAAC TTGAAAAAAA TCGGAAAGTT TACTACATTG TGCCTTCTTC AATGTCATTT
GAGAAGGAGA AAGAAATATT AGAACGATTA GCAAAAGGTA GTGATACAGC AGTTTTTTAT
TTACTTGTTA CGCGGTTTAA ACAACTGCCT TATTACTTTG ACAAGCGTGA AAAAGCAACA
ATGAAAACAG AGTTAGGCAC GGTGGGGCTT TCGATGCTTT TTCGGCGTAT TTTGAGAAGT
TTTAAAAAAG ATGAAATTCC GCTTTATTTT TCATTGCAGG ATTCAGCCGG ATTTTTAGAG
ATGCTGATTC AATTGAGAGC AGAATTGCTG ACAGCCAATC TGTCAGTAGA AAATTTGCCA
GATAATCCTA AGAATCAAGA ATTGAAAAAA ATTCTAACAA CATTTGAAGC TGAATTATCT
GTGGAATATG CGAATTACTC AGAATTTGGA GATTTTACAA ATCGACTTGC TGATGGAGAA
TTTGATCAGC AGCTTAAAGA TGTAACAATT ATCATTGATG GTTATACTCG ATTTTCTGCG
GAAGAAGAGT TATTTATTGA AAGTATTCAA GAGAAAGTTG CCCGCTTTGT TGTTGGAACT
TATAGTGATG AAAATTCACT GACAGCTGGT TCGGAGACAA TTTACGTGGG AACGAGTCAG
ATGATTACTC GCTTTCGAAA TAAATATCCA GTAGAATTAA GAAAAATAGC TTCTTCATCT
GTCAACGAAG TTTACAGTAA GTTGACAAGA ATGCTTGATT TAGATTCTCG TTTTGTTATT
ACTGATGAAA AAATTGAATT AAAAGCAGAA GATGAAAAGT ATTTTAGAAT CTGGGAAGCT
GAAAATCAAA AAGTTGAAAT CGAACGAGTG GCTAAGGAAA TTAGACAAAA AATCAGCCAA
GGGGCTTTTT TCAAAGATTT TACTGTTTTA GTTGGTGATC CAGCAGCTTA TGAGATTACT
TTGAAAGAAA TTTTTGATCT CTATGAGATT CCATTTTTCT ATGCTCAAGA AGAATCCATG
AGCCAGCATC CTTTAGTGAT CTTTTTTGAA AGTCTATTTG CCATCAAAAA AAATAATTAT
CGAACGGATG ATGTTGTCAA TCTTTTAAAA AGTAAAGTTT ACACAGATGT CAACCTTGAT
GAAGAAGTTA TTGATTACTT TGAATACTAT GTTCAAAAGT ATAAAATTTC AGGTCGCAAG
AAATTTACAG AAGAATTTAT TGAAAGTGAA TTTTCTCAAA TTGAATTAGT TAATGAAATG
CGGGAAAAAC TACTTGGAAG TGAATCTCCT TTACAAGTAT TTTTAGGGAA TAATCGACAA
AAAACAGGAA AAAAATGGGT TTCTGATTTA CAAGCTTTAC TTGAAAATGG AAATGTAATG
GCAAATATGA ATGCCTATTT TTCCGCTGCC GAATTACAAA ATGAACATCA AATGGCTGAT
AAACATGAAC AAGTCTGGCA AATGTTAATT TCAACGCTGA ATGAGTTCTT CGCTGTTTTT
TCTGATGAGA AATTGAAAAG TGTAGAGTTT TTAGATATCT TATTGGCTGG TTTGAAAAAT
GCAAAATATC GTCAAATTCC AGCAAATGTT GATGTTGTTA ATGTTAAAGA CTATGAACTT
GTTGAACCCA AAACAAATAA CTATATTTAT GCTATTGGTT TAAGTCAAAC GAATTTCCCT
CGAATAAAGA AAAATTCGAC GCTCTTATCA GATGAAGAGC GATTAGAAAT TAATCAGACA
ACTGATGAAA ATCAATTTAT TGAGCAACTT AATGTTGCCA ACTATCAAAA AAATCAGTTT
ACAGTCTTGT CTTTGATTAA CTCGGCAAAA GAGAGTTTAG TTTTGTCAAT GCCACAGATT
ATGACCAATG AACAGGGAGA ATTTTCTCCA GTTTTTCAAT TATTTTTAAA AGATGCTGAT
GAAAAAATCC TTCAAAAAAT TCAAGGAGTG AATCTTTTTG AAAGTCTAGA ACACATTGGA
AATAGCCGTT CGGTCATTGC CATGATTGGA CAAATTGAAC GTGAATTAGT TGAATCTGAG
GAAACCAATG AGGATAAGCG AGTTTTTTGG TCTAGTATTT TTCGAATATT AGTGAAATCA
AATGCTGATT TTCAAAAAAT ATTACTCGAT TTAGCTAAAG ATATTGACAC TGTAAATTTG
GCACCAGACA CACTAGAACA AATTTATGGT GATAAAATTT ATGCTTCTGT CAGTTCTTTT
GAACGTTTTT ACAATTGTGA ATATCAGTAC TTTTTAGAGA ATACACTAAG TCTGGAAACT
TTTGAAAATA TTGATATTAA TTCTAAAATT GTTGGGAATT TTTTCCATGA AGTTTTTGAA
AAAGTCATGA AAGAGACTGA CTTATCAGCA GAAAATTTTG ATGAAAAGTT GACACTTTTT
TTACAAGAAG TTGACAAAAA CTATTCACGC TATTTTACAC AAGATGCAAC GGCAAGATTT
ACTTGGAGTA ATTTAGAAGA GATTGTCAGG CAAACGGCGA CTGTTTTGAA AGCAACTGTA
TCTACTGATG AACTAAAAAC TTTACTGACA GAAAGTAGTT TTGGTTTATC TAAAAGTGAG
TTAGGAAATT TTTCAGTTGA TGATATTTAT TTACGAGGAA GAATTGACCG TCTTGACCAA
CTTTCTACAG ATTACTTAGG AGTGATTGAC TATAAATCAA GTGCTCATTC ATTTAAATTG
CAAGAGGCTT ATGATGGACT AAGTTTACAA TTTATGACCT ATTTAGATGT GATAAAACAA
GCTTTTCCTA ATCAAAAAAT CTGGGGTGCA CTTTATTTAC AATTTAAAAA CCAACCGATT
AACCTATCAG AAATTAATCA GTTGTCGGAA ATTGCTAACA TTTTGAAAGA ATCAATGCGT
TATGATGGAT TAGTATTAGA AGATGCAGCT GAGCAAATAA AAGGTATTGA AAATATTGCT
TTAAAAAATA CTAATAGTTA TAATGAAGAA GAATTTGAGC AACTTTTAAA ATTAAATGAG
GAACATTACC GGGCAGCTGG TCAGCGATTG AAAAATGGAA AAATTGCAAT CAATCCAATA
ATGAAACGCT CCGAAGGGAT TGATCAGTCA GGTAATGTCC GCGGCTGTCG ATATTGTCCT
CTTAAATCGA TTTGTCGATT TGAAGCAAAT ATTCATATGA ATGAGCACAG CCGTGAAATC
GGACAAAAAT CCCAAGCAGA AATCCTAGCA GAATTAAAAG GAGAAGGGCG AGATGAGTGA
|
|---|
| Protein sequence | MEILYTEITQ DLTEGLLEIA LEELEKNRKV YYIVPSSMSF EKEKEILERL AKGSDTAVFY
LLVTRFKQLP YYFDKREKAT MKTELGTVGL SMLFRRILRS FKKDEIPLYF SLQDSAGFLE
MLIQLRAELL TANLSVENLP DNPKNQELKK ILTTFEAELS VEYANYSEFG DFTNRLADGE
FDQQLKDVTI IIDGYTRFSA EEELFIESIQ EKVARFVVGT YSDENSLTAG SETIYVGTSQ
MITRFRNKYP VELRKIASSS VNEVYSKLTR MLDLDSRFVI TDEKIELKAE DEKYFRIWEA
ENQKVEIERV AKEIRQKISQ GAFFKDFTVL VGDPAAYEIT LKEIFDLYEI PFFYAQEESM
SQHPLVIFFE SLFAIKKNNY RTDDVVNLLK SKVYTDVNLD EEVIDYFEYY VQKYKISGRK
KFTEEFIESE FSQIELVNEM REKLLGSESP LQVFLGNNRQ KTGKKWVSDL QALLENGNVM
ANMNAYFSAA ELQNEHQMAD KHEQVWQMLI STLNEFFAVF SDEKLKSVEF LDILLAGLKN
AKYRQIPANV DVVNVKDYEL VEPKTNNYIY AIGLSQTNFP RIKKNSTLLS DEERLEINQT
TDENQFIEQL NVANYQKNQF TVLSLINSAK ESLVLSMPQI MTNEQGEFSP VFQLFLKDAD
EKILQKIQGV NLFESLEHIG NSRSVIAMIG QIERELVESE ETNEDKRVFW SSIFRILVKS
NADFQKILLD LAKDIDTVNL APDTLEQIYG DKIYASVSSF ERFYNCEYQY FLENTLSLET
FENIDINSKI VGNFFHEVFE KVMKETDLSA ENFDEKLTLF LQEVDKNYSR YFTQDATARF
TWSNLEEIVR QTATVLKATV STDELKTLLT ESSFGLSKSE LGNFSVDDIY LRGRIDRLDQ
LSTDYLGVID YKSSAHSFKL QEAYDGLSLQ FMTYLDVIKQ AFPNQKIWGA LYLQFKNQPI
NLSEINQLSE IANILKESMR YDGLVLEDAA EQIKGIENIA LKNTNSYNEE EFEQLLKLNE
EHYRAAGQRL KNGKIAINPI MKRSEGIDQS GNVRGCRYCP LKSICRFEAN IHMNEHSREI
GQKSQAEILA ELKGEGRDE
|
|---|
| |