Gene LACR_D21 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D21 
Symbol 
ID4405874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand- 
Start bp22969 
End bp23985 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content38% 
IMG OID639654622 
ProductABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
Protein accessionYP_796548 
Protein GI116326628 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTG AAAATATTTT GGAAGCAAAA CAAGTGAGTG TTGCCTTTCG GATTGCTGGT 
AAATTTCAAA AAGCAATTTA TGATATTGAT TTAAGTCTTA GACGTGGTGA AGTTTTAGCC 
ATTGTTGGGG AATCAGGTTC TGGGAAATCA ACTTTGGCAA CTGCTGTTAT GGGATTACAC 
AACCCAAATC AAACTCAAAT TACAGGATCC ATTTTATTGG ATGAGGAAGA AGTGATTGGT 
AAAACGGGTG ACTCCATGGC AAGTATTCGA GGAAGTAAAG TTGGAATGAT TTTTCAAAAT 
CCACTCACTG CGCTTAATCC ATTGATGAAA ATTGGGCAGC AAATCAAGGA AATGTTGGCC 
GTGCATGATG TTTATCCAGA AAATCAGTAT GAAAGTAGAA TCTTTCAACT TTTAGAACAA 
GTAGGAATTC CAAATCCTAA AAGAGTCGTT AATCAATTTC CTCACCAACT TTCAGGCGGG 
ATGAGACAAA GAGTAATGAT TGCAATAGCC ATTGCCAATG ACCCAGATTT GATTATTGCT 
GATGAGCCAA CGACTGCTTT AGACGTTACC ATTCAAGCTC AGATTTTAGA CTTGATTTTA 
GAAATACAAA AGAAGAAGAA TGCTGGGGTT ATTCTAATTA CTCATGATTT AGGAGTTGTT 
GCTGAAGTTG CTGATACAGT GGCGGTGATG TATGCCGGAC AACTCGTCGA AAAAGCTTCT 
GTTGAAGAGC TTTTTCAAAA TCCCAAACAT CCATACACCC GGTCACTTTT GCGTTCAAAT 
CCATCTGCCG AAACAGTTTC GGATGATTTA TATGTGATTC CAGGGTCTGT GCCTTCTCTG 
TCAGAAATTG AGTATGACAA AGATTTATTT CTCGCTCGAG TGCCTTGGAT GAAAGAAGAA 
GCTCAAAAAG TAATTTCGGA AAAAATGACT GAAATTTCTT CAAATCATTT TGTTCGAGGT 
CAGGCTTGGA AAAAATTTGA ATTTCCAGAT CAAAAATTGA AAGGGGGTAA AAAGTGA
 
Protein sequence
MESENILEAK QVSVAFRIAG KFQKAIYDID LSLRRGEVLA IVGESGSGKS TLATAVMGLH 
NPNQTQITGS ILLDEEEVIG KTGDSMASIR GSKVGMIFQN PLTALNPLMK IGQQIKEMLA 
VHDVYPENQY ESRIFQLLEQ VGIPNPKRVV NQFPHQLSGG MRQRVMIAIA IANDPDLIIA 
DEPTTALDVT IQAQILDLIL EIQKKKNAGV ILITHDLGVV AEVADTVAVM YAGQLVEKAS 
VEELFQNPKH PYTRSLLRSN PSAETVSDDL YVIPGSVPSL SEIEYDKDLF LARVPWMKEE 
AQKVISEKMT EISSNHFVRG QAWKKFEFPD QKLKGGKK