Gene LACR_D19 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D19 
Symbol 
ID4405872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand- 
Start bp21073 
End bp22032 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content38% 
IMG OID639654620 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_796546 
Protein GI116326626 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG TAATTATTAG ACGTATTTTA TTGATGATCC CTCAATTATT TATCTTGAGT 
ATTCTTGTTT TCTTCTTTGC TAAATTGATG CCTGGTGATC CTTTTTCAGG GTTGATTGGT 
CCTCATACCG ACCCACATGA AGTTGAAGCA TTAAGACGGG CAGCAGGTTT ATATGACCCT 
TGGTGGGAGC AGTATCTCAG GTGGCTAGGG AATGCCATAC ATGGGAATTT AGGAATGTCC 
TATAATCTCA AAGAGCCTGT GATGACTGTC ATTGGACATA GAGCGATTAA TACTTTTTGG 
ATGTCACTTT TGTCAGTTAT TTTAACTTAC TTATTTGCTA TTCCGATGTC GATAGTTGCA 
GCTCGAAATG AAGGAAAATG GCAAGACCAA TTGTGGTTGA CCTATAATTC AATTACTTTT 
GGTATTCCAC CTTACGTATT CTATCTCTTG ATTATCTTTA TCTTTGGTTA TAGTCTTAAT 
TGGTTTCCGA CAGGTGGGAC GGTAAGTCCA GATGCGATGG GAATAATTCC TGTTTTCTTT 
AGTAAGATTT ATCACATGAT TCTTCCGGCT TTTAGTTTGG CGGTCTTTGG AACAGTTGGA 
ATCTTTACTT ACTTCCGCTC AGGAATTTTA GATGAACAAA CACAAGATTA TGTACGAACG 
GCTCGAGCCA AAGGGGTTAA GGAAAAAGTG ATTTTTAGAC GTCATATTTT GAGAAATGCC 
TCATTACCAA TTGCTTCTAA TTTTGGATTT GTGATTACTG GACTCTTGGG AGGAGCAATC 
TTTGCTGAAA CAATTTTCGG ATATCCTGGC TTAGGACAAC TTTTTATTAC TTCAATCAGT 
GGGCGAGATT ATTCAATGAT TACGGCTTTG ATTTTATTAA ATGGTTTTTT GGGACTTCTT 
GGAGCCCTCC TGTCGGATAT TATCATGGCA ATGGTTGACC CACGAATTCG GATTCAATAA
 
Protein sequence
MWKVIIRRIL LMIPQLFILS ILVFFFAKLM PGDPFSGLIG PHTDPHEVEA LRRAAGLYDP 
WWEQYLRWLG NAIHGNLGMS YNLKEPVMTV IGHRAINTFW MSLLSVILTY LFAIPMSIVA 
ARNEGKWQDQ LWLTYNSITF GIPPYVFYLL IIFIFGYSLN WFPTGGTVSP DAMGIIPVFF 
SKIYHMILPA FSLAVFGTVG IFTYFRSGIL DEQTQDYVRT ARAKGVKEKV IFRRHILRNA 
SLPIASNFGF VITGLLGGAI FAETIFGYPG LGQLFITSIS GRDYSMITAL ILLNGFLGLL 
GALLSDIIMA MVDPRIRIQ