Gene LACR_D13 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D13 
Symbol 
ID4405866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand+ 
Start bp10533 
End bp11243 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID639654614 
Producttransposase 
Protein accessionYP_796540 
Protein GI116326620 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATGACAGCGA GGATATATCA ATGAACTATT TTAAAGGTAA ACAATTTCAA 
AAAGATGTGA TTATTGTCGC TGTTGGTTAT TATCTACGTT ACAATCTAAG CTATCGTGAA 
ATTCAAGAAC TCCTTTATGA TCGTGGGATT AACGTTTGTC ACACAACTAT TTATCCTTGG 
GTACAAGAAT ACAGTAAAGT CCTCTATCAT CTCTGGAAAA AGAAAAATAG ACAGTCCTTC 
TATTCGTGGA AAATGGATGA AACTTATATC AAAATCAAAG GTCGTTGGCA TTATCTCTAT 
CGTGCAATTG ATGCGGATGG ATTGACTTTA GACATCTGGC TACGCAAGAA ACGGGATACT 
CAAGCTGCTT ATGCGTTCTT GAAACGACTA CATAAACAGT TTGGTCAACC AAGAGTAATT 
GTCACGGATA AATCGCCCTC TATTGGTTCT GTATTTAGAA AGTTACAGAG TAACGGTTTA 
TATACTAAGA CAGAGCATCG AACCGTGAAG TATCTCAATA ACCTCATTGA GCAAGACCAT 
CGACCAATCA AACGACGCAA TAAATTTTAT CGAAGTCTAC GAACTGCCTC AACCATGATT 
AAGGGCATGG AAACAATTCG AGGAATATAC AAAAAGAACC GAAGAAATGG AACGCTCTTC 
GGATTTTCGG TATCTACTGA GATTAAGGTC TTAATGGGAA TATTAGCTTA A
 
Protein sequence
MNKNDSEDIS MNYFKGKQFQ KDVIIVAVGY YLRYNLSYRE IQELLYDRGI NVCHTTIYPW 
VQEYSKVLYH LWKKKNRQSF YSWKMDETYI KIKGRWHYLY RAIDADGLTL DIWLRKKRDT 
QAAYAFLKRL HKQFGQPRVI VTDKSPSIGS VFRKLQSNGL YTKTEHRTVK YLNNLIEQDH 
RPIKRRNKFY RSLRTASTMI KGMETIRGIY KKNRRNGTLF GFSVSTEIKV LMGILA