| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_D08 |
|---|
| Symbol | |
|---|
| ID | 4405861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008506 |
|---|
| Strand | - |
|---|
| Start bp | 6798 |
|---|
| End bp | 7379 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639654611 |
|---|
| Product | site-specific recombinase, DNA invertase Pin related protein |
|---|
| Protein accession | YP_796537 |
|---|
| Protein GI | 116326617 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.942713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG GGTATGCACG TGTCAGTACT TTTGAACAAA AATTAGAATC TCAAATTGAA
GTTCTGAAAG AAGCAGGAGC AGAAGAAGTT TTCCAAGAAA AGTTTACTGG AACTACAGTC
GAACGTCCAC AATTTAATCT AGTATTTAAA AAGTTAAAGG ATGGTGACAC TTTAATTGTG
ACAAAGTTAG ACCGATTAGC CAGGAACACT AGAGAAGTTT TAGAAATTGT TCAATCGTTA
TTTAATAGAG GAATTAAGGT TCATATATTA AATATTGGTC TTATTGATAA TACACCTACT
GGTCAGCTGA TTTTTACCAT CTTCAGTGCT TTTGCGCAGT TTGAACGAGA CCTTATTGTA
ACCAGGACTC AGGAAGGAAA AAATTTTGCT AAGCTTCATG ATCCAAGTTT TAGGGAAGGG
CGTCCTCAAA AATTTACCGA AGAACAAATT CAATTTGCTT ATGAGTTAAA ACAGCAAGGA
ATGACTTACA AGATGATTGA GCGAAAAACT GGTATCAGTA TTGCGACTCA AAAACGAAGA
TTTATAAAAG CAAAAAATCA AGCTATTGAC AAAGACTATT GA
|
|---|
| Protein sequence | MKIGYARVST FEQKLESQIE VLKEAGAEEV FQEKFTGTTV ERPQFNLVFK KLKDGDTLIV
TKLDRLARNT REVLEIVQSL FNRGIKVHIL NIGLIDNTPT GQLIFTIFSA FAQFERDLIV
TRTQEGKNFA KLHDPSFREG RPQKFTEEQI QFAYELKQQG MTYKMIERKT GISIATQKRR
FIKAKNQAID KDY
|
|---|
| |