Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_D07 |
Symbol | |
ID | 4405899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008506 |
Strand | + |
Start bp | 5532 |
End bp | 6299 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639654610 |
Product | lactose transport regulator |
Protein accession | YP_796536 |
Protein GI | 116326616 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAA AACGACGATT AGAAAAAATT TTAGATATGT TAAAGATTGA TGGGACCATA ACCATAAAAG AAATAATAGA TGAACTAGAT ATTTCCGATA TGACAGCCCG TAGAGACCTT GATGCTCTAG AAGCTGATGG ACTTTTAACA CGTACTCATG GTGGTGCACA ATTGCTTTCC TCTAAAAAGC CACTTGAAAA GACACATATC GAGAAGAAAA GTCTAAATAC AAAAGAAAAA ATTGACATTG CTAAAAAAGC CTGCTCTTTA ATCAAAGATG GCGATACTAT TTTTATTGGA CCCGGAACTA CACTTGTACA ACTGGCATTA GAATTGAAAG GTCGTAAAGG TTATAAAATT CGTGTCATTA CAAATAGTCT CCCTGTGTTC TTGATTCTAA ATGATAGCGA AACCATTGAT TTATTGCTTC TTGGCGGTGA ATATAGAGAA ATAACTGGAG CTTTTGTAGG TTCAATGGCT TCGACAAATT TAAAAGCAAT GAGATTTGCC AAAGCTTTTG TTAGTGCAAA TGCTGTTACC CATAATTCTA TTGCTACATA TAGTGACAAG GAAGGTGTGA TTCAACAACT TGCCCTAAAC AATGCTGTAG AAAAATTCTT ATTAGTAGAC AGTACTAAAT TCGATCGATA CGATTTCTTT AACTTCTACA ATCTAGATCA ACTCGATACC ATCATTACAG ATAACCAGAT TAGCCCTCAA CACTTAGAGG AATTTAGCCA GTACACTACT ATTTTAAAAG CGGACTAG
|
Protein sequence | MNKKRRLEKI LDMLKIDGTI TIKEIIDELD ISDMTARRDL DALEADGLLT RTHGGAQLLS SKKPLEKTHI EKKSLNTKEK IDIAKKACSL IKDGDTIFIG PGTTLVQLAL ELKGRKGYKI RVITNSLPVF LILNDSETID LLLLGGEYRE ITGAFVGSMA STNLKAMRFA KAFVSANAVT HNSIATYSDK EGVIQQLALN NAVEKFLLVD STKFDRYDFF NFYNLDQLDT IITDNQISPQ HLEEFSQYTT ILKAD
|
| |