Gene LACR_D06 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D06 
Symbol 
ID4405898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand- 
Start bp4618 
End bp4992 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content39% 
IMG OID639654609 
Productgalactose-6-phosphate isomerase subunit LacA 
Protein accessionYP_796535 
Protein GI116326615 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01118] galactose-6-phosphate isomerase, LacA subunit 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.230058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATT TTCTTGTAGA AGAAGGTTTT GAGGTAATTG ATGTGACTAA GGACGGACAA 
GATTTTGTTG ATGTTACCTT GGCAGTTGCC TCTGAAGTAA ATAAAGATGA GCAAAACTTA 
GGTATTGTAA TTGATGCTTA TGGAGCTGGT CCATTCATGG TAGCAACTAA AATTAAAGGT 
ATGGTTGCAG CAGAAGTTTC AGATGAACGC TCAGCTTATA TGACACGTGG ACATAACAAT 
GCACGAATGA TTACGGTTGG CGCTGAAATC GTCGGTGATG AGCTTGCTAA AAACATCGCT 
AAAGCTTTCG TCAATGGTAA ATATGATGGC GGACGTCATC AAGTCCGAGT AGATATGCTT 
AACAAGATGT GTTAA
 
Protein sequence
MKNFLVEEGF EVIDVTKDGQ DFVDVTLAVA SEVNKDEQNL GIVIDAYGAG PFMVATKIKG 
MVAAEVSDER SAYMTRGHNN ARMITVGAEI VGDELAKNIA KAFVNGKYDG GRHQVRVDML 
NKMC