Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_D05 |
Symbol | |
ID | 4405897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008506 |
Strand | - |
Start bp | 4086 |
End bp | 4601 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639654608 |
Product | galactose-6-phosphate isomerase subunit LacB |
Protein accession | YP_796534 |
Protein GI | 116326614 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01119] galactose-6-phosphate isomerase, LacB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.305214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATCG CAATTGGATG TGACCACATT GTCACAGATG TAAAAATGGC AGTATCAGAA TTCTTGAAAT CAAAAGGATA TGAGGTCCTT GATTTCGGGA CATATGACCA CGTACGTACT CACTACCCTA TCTATGGTAA AAAAGTCGGT GAAGCAGTAG TAAGTGGTCA AGCAGACTTG GGAGTATGTA TCTGTGGTAC GGGTGTCGGC ATTAACAATG CAGTAAATAA AGTTCCAGGT GTTCGCTCAG CGTTGGTTCG TGATATGACG TCAGCTCTAT ATGCTAAGGA AGAACTTAAT GCGAATGTTA TCGGTTTTGG TGGAATGATT ACTGGTGGTC TTCTTATGAA TGACATCATT GAAGCTTTCA TTGAAGCTGA GTACAAACCA ACAGAAGAAA ATAAAAAATT GATTGCAAAA ATCGAACACG TTGAAACACA TAATGCACAT CAAGCAGATG AGGAATTCTT TACAGAATTC CTTGAAAAAT GGGACCGTGG TGAGTACCAC GATTAA
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Protein sequence | MRIAIGCDHI VTDVKMAVSE FLKSKGYEVL DFGTYDHVRT HYPIYGKKVG EAVVSGQADL GVCICGTGVG INNAVNKVPG VRSALVRDMT SALYAKEELN ANVIGFGGMI TGGLLMNDII EAFIEAEYKP TEENKKLIAK IEHVETHNAH QADEEFFTEF LEKWDRGEYH D
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