| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_D03 |
|---|
| Symbol | |
|---|
| ID | 4405895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008506 |
|---|
| Strand | - |
|---|
| Start bp | 2160 |
|---|
| End bp | 3140 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639654606 |
|---|
| Product | tagatose 1,6-diphosphate aldolase |
|---|
| Protein accession | YP_796532 |
|---|
| Protein GI | 116326612 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3684] Tagatose-1,6-bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR01232] tagatose 1,6-diphosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000270283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACTTA CAGAACAGAA ACGCAAATCT TTGGAAAAAC TTTCAGATAA AAACGGTTTT
ATCTCAGCTT TGGCATTTGA CCAACGTGGT GCTTTGAAAC GTTTGATGGC ACAGTATCAA
GATACAGAAC CAACTGTAGC TCAAATGGAA GAACTAAAGG TTTTGGTTGC TGATGAACTT
ACAAAATACG CTTCTTCAAT GTTGCTTGAC CCTGAATATG GACTTCCAGC AACAAAAGCA
TTGGATAAAG AAGCAGGTCT TCTTCTTGCC TATGAAAAAA CAGGTTATGA TACATCAAGT
ACAAAACGTT TGCCTGACTG CTTGGATGTT TGGTCTGCAA AGCGTATCAA AGAGCAAGGC
GCTGATGCCG TTAAGTTCTT GCTTTACTAT GATGTAGACA GCTCAGATGA ACTTAACCAA
CAAAAACAAG CTTATATTGA ACGTGTTGGT TCTGAATGTG TCGCTGAAGA TATTCCTTTC
TTCTTGGAAA TCCTTGCTTA TGATGAAGAA ATCTCAGATG CAGGTTCCGT TGAATATGCA
AAAGTGAAAC CTCGCAAAGT CATTGAAGCG ATGAAAGTTT TCTCTGATCC ACGATTTAAC
ATTGATGTTC TTAAAGTAGA GGTACCAGTT AACGTTAAAT ATGTCGAAGG TTTTGCTGAT
GGTGAAGTGG TTTACAGTAA AGCTGAAGCT GCTGACTTCT TTAAAGCACA AGAAGAAGCG
ACTAACCTTC CATACATCTA CCTAAGTGCA GGTGTATCTG CTAAATTGTT CCAAGAAACA
TTGCAATTTG CTCACGACTC AGGTGCCAAG TTTAATGGTG TGCTTTGTGG ACGTGCTACT
TGGGCAGGAT CTGTAGAACC TTACATCAAA GAAGGTGAAA AAGCAGCACG TGAATGGTTG
CGTACTACTG GATTCGAAAA TATTGATGAA CTTAACAAAG TTCTTGTTAA AACAGCTAGT
CCATGGACTG ATAAAGTATA G
|
|---|
| Protein sequence | MVLTEQKRKS LEKLSDKNGF ISALAFDQRG ALKRLMAQYQ DTEPTVAQME ELKVLVADEL
TKYASSMLLD PEYGLPATKA LDKEAGLLLA YEKTGYDTSS TKRLPDCLDV WSAKRIKEQG
ADAVKFLLYY DVDSSDELNQ QKQAYIERVG SECVAEDIPF FLEILAYDEE ISDAGSVEYA
KVKPRKVIEA MKVFSDPRFN IDVLKVEVPV NVKYVEGFAD GEVVYSKAEA ADFFKAQEEA
TNLPYIYLSA GVSAKLFQET LQFAHDSGAK FNGVLCGRAT WAGSVEPYIK EGEKAAREWL
RTTGFENIDE LNKVLVKTAS PWTDKV
|
|---|
| |