Gene LACR_C24 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_C24 
Symbol 
ID4405812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008505 
Strand- 
Start bp27663 
End bp28298 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content24% 
IMG OID639654565 
Productexopolysaccharide biosynthesis protein 
Protein accessionYP_796492 
Protein GI116326571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3955] Exopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTTAG ATAAAATTAG AAAAATAAGT AGAAATATTA AAGATAATAA AGATAGAAAA 
ACTTTGGGTA ACAAGAACTT TACAATTTTT GCTAGTAATT GTATAGGGGG GGTAATCTAT 
CATAATCTTG GCCATAAATT TTTGTCACCT ACAATAAATT TATGGATTAA ACCTAATGAT 
TATATAAAAA TGTTAGAAAA TCCACATAAA TATTTTGTGT CAGATAAAAT GATTGAAGTG 
AAAAATAGTG GATTACCGTA TCCTGTTGGT AGTATAAATG GAGTAAAAAT TTATGGACAA 
CATTATGATT CTTTTAAGCA ATTAAAAGAT AAATGGGATC AGCGTTCTAA GAGAATTAAT 
TGGGATAATA TATATGTCTT TTTTATCGAA AGAGATGGAG CTCCAAAATC TAATTTGTTA 
GATTTTGATA AGTTACCGTA TAACAAAGTT GTCTTTACTA AAAAGAATTA TTCTGATGTA 
AAAAGCTCAT TAGTTATTCC TAAAAGCTAT GATAATGAAC ATAATGAAGT AAATAATTTA 
TGTGATAATC TTAATAGATT TACTGGTTTA AAGTATATAG ACAAATTTGA TTATGTTAAT 
TTCTTTAATA ATAATGAGAT AAAATTAAAT AAGTAG
 
Protein sequence
MVLDKIRKIS RNIKDNKDRK TLGNKNFTIF ASNCIGGVIY HNLGHKFLSP TINLWIKPND 
YIKMLENPHK YFVSDKMIEV KNSGLPYPVG SINGVKIYGQ HYDSFKQLKD KWDQRSKRIN 
WDNIYVFFIE RDGAPKSNLL DFDKLPYNKV VFTKKNYSDV KSSLVIPKSY DNEHNEVNNL 
CDNLNRFTGL KYIDKFDYVN FFNNNEIKLN K