Gene LACR_C12 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_C12 
Symbol 
ID4405800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008505 
Strand- 
Start bp12446 
End bp13126 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content39% 
IMG OID639654553 
Producttransposase 
Protein accessionYP_796480 
Protein GI116326559 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATT TTAAAGGAAA ACAATTCCAA AAAGACGTCA TTATTGTCGC TGTTGGTTAC 
TACGTGCGTT ACAATCTAAG CTATCGTGAA GTTCAGGAAT TGTTATATGA TCGTGGAATA 
AATGTTTGTC ATACTACGAT TTATCGTTGG GTGCAAGGGT ACAGCAAAGT CCTCTATGAT 
CTTTGGAAGA AGAAAAATAG ACAATCCTTC TATTCATGGA AAATGGACGA AACCTATATC 
AAAATTAAGG GACGTGGGCA TTATCTTTAT CGTGCAATTG ATGCGGACGG CTTAACCTTA 
GATATCTGGT TACGAAAGAA ACGGGATACG CAAGCAGCCT ATGCTTTCTT AAAACGACTC 
CATAAACAGT TTGGTGAGCC GAAAGCAATT GTGACCGATA AAGCACCTTC TCTTGGCTCC 
GCCTTTAGAA AGTTACAGAG TGTGGGTTTA TATACTAAGA CAGATCACCG AACTGTGAAG 
TATCTTAACA ATTTAATAGA ACAAGACCAT CGACCTATTA AACGACGGAA TAAATTTTAT 
CAAAGTCTCC GTACAGCCTC TTCCACGATT AAGGGCATGG AAACAATTCG AGGAATATAC 
AAAAAGAACC GAAGAAATGG AACGCTCTTC GGCTTTTCGG TGTCTACTGA AATCAAGGTA 
TTAATGGGAA TAACAGCCTA A
 
Protein sequence
MNDFKGKQFQ KDVIIVAVGY YVRYNLSYRE VQELLYDRGI NVCHTTIYRW VQGYSKVLYD 
LWKKKNRQSF YSWKMDETYI KIKGRGHYLY RAIDADGLTL DIWLRKKRDT QAAYAFLKRL 
HKQFGEPKAI VTDKAPSLGS AFRKLQSVGL YTKTDHRTVK YLNNLIEQDH RPIKRRNKFY 
QSLRTASSTI KGMETIRGIY KKNRRNGTLF GFSVSTEIKV LMGITA