Gene LACR_C10 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_C10 
Symbol 
ID4405798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008505 
Strand
Start bp10270 
End bp11511 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content40% 
IMG OID639654551 
Productmajor facilitator superfamily permease 
Protein accessionYP_796478 
Protein GI116326557 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAA ATCGCTATGT TGTTGCGTTT GCAGGTGTCA TGTTTCATTT AATGATTGGT 
TCAGTTTATG CTTGGAGTGT TTTTACTAAT CCAATTGCAA AACAAAATGG TTGGGCAGAA
TCCTCAGTCG CTCTTGCATT TAGTATCGCT ATTTTCTTCT TGGGAATGTC AGCCGCCTTT
ATGGGCAAAG TCGTTGAAAA AATAGGCCCT AGACTAACGG GAACTATTGC TAGCTTTCTT
TACGGAACTG GAACCATTAT GACTGGTTGG GCTATCCATC AAAATTCAAT TTGGCTATTA
TATCTCTCAT ATGGTGTCAT AGGCGGATTA GGACTGGGAG CAGGATACGT TACCCCTGTA
TCAACAATTA TTAAATGGTT TCCAGACAAA CGCGGTTTAG CAACGGGGTT AGCTATTATG
GGATTTGGTT TTGCAGCAAT GCTGACTGGT CCTGTTGCTC AACAGCTAAT GGCTAGTGTT
GGTCTTGAAC AAACATTCTA TCTCTTAGGA ACATTTTATT TTGTTATTAT GCTGCTCGCT
GCACAGTTTA TTGTTCGTCC AAATCTGGCA CTATCAAGCA CTACTGAAAA TAGCATTTCT
CAAAAAAAGG GAACACGTCT AACCCGAGGA CCGGAGCTAA CAGCTAACCA AGCCCTCAAA
ACTAAATCCT TCACTTTTCT TTGGATAATG TTCTTTATCA ATATTACATG CGGGATCGGC
CTTGTCTCAG CTGCATCCCC CATGGCTCAA AGTATGACCG GCATGTCTGT CCAAACAGCC
GCAATTATGG TTGGAATCAT AGGCCTTTTC AATGGCTTTG GACGTTTGAT ATGGGCAACT
TTGTCTGATT ATATCGGGCG CCCTGCTACT TTCAGTGCCA TTTTTATTCT CGATATTGTA
ATGCTTTCAG CCATACTCAT CTTCAAATTA CCGCTCCTAT TTGTCATTGC ATTATGCTTG
TTGATGTCTT GTTATGGAGC AGGCTTTTCT GTCATCCCAG CCTACTTAGG TGATGTCTTT
GGTACTAAAG AATTAGGAGC TGTTCATGGA TATGTACTGA CAGCATGGGC TGCTGCCGGA
GTTGTTGGAC CATTACTATT ATCATTAACA CATCAACTGT TCCACAATTA TACTTTGACA
TTAGCTGCCT TTATTTTGAT TGATCTATTG GCACTGCTAA TCTCATTCTG GATACAACGA
GATTTCATTA AAGCCAGCAA ATTAATAAAA AGAAAATCAT AA
 
Protein sequence
MKTNRYVVAF AGVMFHLMIG SVYAWSVFTN PIAKQNGWAE SSVALAFSIA IFFLGMSAAF 
MGKVVEKIGP RLTGTIASFL YGTGTIMTGW AIHQNSIWLL YLSYGVIGGL GLGAGYVTPV
STIIKWFPDK RGLATGLAIM GFGFAAMLTG PVAQQLMASV GLEQTFYLLG TFYFVIMLLA
AQFIVRPNLA LSSTTENSIS QKKGTRLTRG PELTANQALK TKSFTFLWIM FFINITCGIG
LVSAASPMAQ SMTGMSVQTA AIMVGIIGLF NGFGRLIWAT LSDYIGRPAT FSAIFILDIV
MLSAILIFKL PLLFVIALCL LMSCYGAGFS VIPAYLGDVF GTKELGAVHG YVLTAWAAAG
VVGPLLLSLT HQLFHNYTLT LAAFILIDLL ALLISFWIQR DFIKASKLIK RKS