Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_B4 |
Symbol | |
ID | 4405791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008504 |
Strand | + |
Start bp | 4328 |
End bp | 4765 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 639654538 |
Product | response regulator |
Protein accession | YP_796465 |
Protein GI | 116326543 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.283822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTC ATATAAATAT TAACAAAGAT TTATCTGAAG ATACTGTTAA TTTTTCAATT AAAGAAATGA CTCCTGAGTT ATCACAAATA ATTAATAATT TACAAAATTT AAATTTCAAA ATAGTCGCTA ATAGAAGTGG GAAAAATTAT CAACTGGATT TTAATGACAT CGTAACCATT TATTCAGAAA ATAAAAAAAT AATAGTCTTT ACAGAGGACA AACAACAATA TTTTTTGAAC GGTTCATTAA AAAATATTAT TGAAAAACTC CCTTATTATT TTTTGAAAAT ATCAAGTTCC GAGATTATTA ACACGACTAA AATAACTTGT TTTGAATTTA CTTTTGGTGG AAAAGTTAAA ATTTACTTTA AAAACAAGAA CTTTACTTAC TCAAGTAGAA GCTATTTAAA AAACATTAGG AGGTTTTTTG GATTATGA
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Protein sequence | MEIHININKD LSEDTVNFSI KEMTPELSQI INNLQNLNFK IVANRSGKNY QLDFNDIVTI YSENKKIIVF TEDKQQYFLN GSLKNIIEKL PYYFLKISSS EIINTTKITC FEFTFGGKVK IYFKNKNFTY SSRSYLKNIR RFFGL
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