Gene PA14_73160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_73160 
Symbol 
ID4385276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6515098 
End bp6516303 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID639328497 
Productputative permease 
Protein accessionYP_794026 
Protein GI116053699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.591701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA AAATTTCCCC GCCTTCACAG AAGCTCGACG GCCTGTTCCT GCTGGCCCTG 
TCGATGGCCG TGTTCTTCGT CGGCGTGACC GAGTTCATGC TGTCCTCCAT GCTCGGGCCG
CTGGCGCAGG CGTTCCACAC CACTACCAGC GGCGCCGCCT GGCTGATCTC CAGCTACGCG
TTCTCCTATG CGATCGCCGC GCCGTTGCTG GGCTACTTCT CCGACCGCAT GCAACGCAGG
AAGCTGCTGC TGCTCGCCCT GATCCTCTTC GCCGTCGATA CCCTGGCCAT CGTCATCGCC
CCGACCCTGG AAATTGCCGT TGTCCTGCGG GTAATCGGGG GCATCGCCTC GGCAATCATC
ATTCCGACCA CCTTCGCCCT GGTCGCGGAG GTGGTCGCCC CGCAAAGACA GGCCGGTGCC
ATGGGCCAGG TGATGCTCGG CATGACCCTC GGCATTGCCG CCGGCCCGGC ACTGGCCGGC
CTCCTCTCGG ACTTCTTCGG CTGGGCGACG CCCTTCCTGA TGGTCTCGTG CGGTTGCGTG
CTGGTCTTCC TGATGGCGCG CCAGCGCCTT CCCGTGCAAG CCGTGGCACC GCGCGCCGAG
GGCCACGCGC TGGGCTGGTG CAGGCAATGG AGCATCCTCA GGCCACTGAT CGCCAAGGGT
GCCTGGAACG GCACCGGGGT CGCCGGCCTG CTTCTCTCGG GAGAGGTGCT GCGCCAGCGC
TACGGCTTCA GCACCGCGCA GATAGGCATC AGCATCGCCG CCTTCGGCGT GGGCCTGGCC
GTGGGGAACC TCGCCGCGGG TTACCTGCGG CGCTACCTGA AGCGCGACGA AGACATGCTC
CTGCTGGTGC TGGCGCTCCT GGTGCTATCG ATGTCGACCT TCATGCTCCT GCCGCTACCG
TTGCCCGTGG CGCTCTTCTG CCTGGGCGCC TGGGGCGCCG CGCTGGGCCT GGGCGCGCCG
GCGGGCACGG TGGTACTCGC CTCGCGCTCC GGGCCGGACA AGGGCATGGT GCTGTCGTTC
GCCGAGACGT TCAACAACAT CGCCATTCTC GCCAGCGTGC CCCTGGCTGT GCGACTGCTG
GAGCTGAAGG GGCCGCCCGC CACCCTGTGG GTATTGGGCA TCGGCCTGGG GATCGGCGCC
TGGTTCACCG TGCTGGACTG GTTCGCCAGC CGCAGGAGCG ACGAGGCGCT GCCGTTGCGC
GATTGA
 
Protein sequence
MNQKISPPSQ KLDGLFLLAL SMAVFFVGVT EFMLSSMLGP LAQAFHTTTS GAAWLISSYA 
FSYAIAAPLL GYFSDRMQRR KLLLLALILF AVDTLAIVIA PTLEIAVVLR VIGGIASAII
IPTTFALVAE VVAPQRQAGA MGQVMLGMTL GIAAGPALAG LLSDFFGWAT PFLMVSCGCV
LVFLMARQRL PVQAVAPRAE GHALGWCRQW SILRPLIAKG AWNGTGVAGL LLSGEVLRQR
YGFSTAQIGI SIAAFGVGLA VGNLAAGYLR RYLKRDEDML LLVLALLVLS MSTFMLLPLP
LPVALFCLGA WGAALGLGAP AGTVVLASRS GPDKGMVLSF AETFNNIAIL ASVPLAVRLL
ELKGPPATLW VLGIGLGIGA WFTVLDWFAS RRSDEALPLR D