Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_72760 |
Symbol | |
ID | 4383635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6480480 |
End bp | 6481268 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639328462 |
Product | putative beta-lactamase |
Protein accession | YP_793991 |
Protein GI | 116053664 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.40823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCCTC TCCTCTTCAG CGCCCTTCTC CTGCTCTCCG GGCATGCCCA GGCCAGCGAA TGGAACGACA GCCGGGCCGT GGACAAGCTA TTCGGAGCGG CCGGTGTGAA AGGCACCTTC GTCCTTTACG ATGTGCAGCG GCAGCGCTAT GTCGGCCATG ACCGGGAGCG CGCGGAAACC CGCTTCGTTC CCGCTTCCAC CTACAAGGTG GCGAACAGCC TGATCGGCTT ATCCACAGGG GCGGTTAGAT CCGCCGACGA GGTTCTTCCC TATGGCGGCA AACCCCAGCG CTTCAAGGCC TGGGAGCACG ACATGAGCCT GCGCGACGCG ATCAAGGCAT CGAACGTACC GGTCTACCAG GAACTGGCGC GGCGCATCGG CCTGGAGCGG ATGCGCGCCA ATGTCTCGCG CCTGGGTTAC GGCAACGCGG AAATCGGCCA GGTTGTGGAT AACTTCTGGT TGGTGGGACC GCTGAAGATC AGCGCGATGG AGCAGACCCG CTTTCTGCTC CGACTGGCGC AGGGAGAATT GCCATTCCCC GCCCCGGTGC AGTCCACCGT GCGCGCCATG ACCCTGCTGG AAAGCGGCCC GGGCTGGGAG CTGCACGGCA AGACCGGCTG GTGCTTCGAC TGCACGCCGG AACTCGGCTG GTGGGTGGGC TGGGTGAAGC GCAACGAGCG GCTCTACGGC TTCGCCCTGA ACATCGACAT GCCCGGCGGC GAGGCCGACA TCGGCAAGCG CGTCGAACTG GGCAAGGCCA GTCTCAAGGC TCTCGGGATA CTGCCCTGA
|
Protein sequence | MRPLLFSALL LLSGHAQASE WNDSRAVDKL FGAAGVKGTF VLYDVQRQRY VGHDRERAET RFVPASTYKV ANSLIGLSTG AVRSADEVLP YGGKPQRFKA WEHDMSLRDA IKASNVPVYQ ELARRIGLER MRANVSRLGY GNAEIGQVVD NFWLVGPLKI SAMEQTRFLL RLAQGELPFP APVQSTVRAM TLLESGPGWE LHGKTGWCFD CTPELGWWVG WVKRNERLYG FALNIDMPGG EADIGKRVEL GKASLKALGI LP
|
| |