| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_72420 |
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| Symbol | |
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| ID | 4385156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 6450947 |
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| End bp | 6452962 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639328435 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_793964 |
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| Protein GI | 116053637 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0411466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG ACGACGTCCA GCGCTGGAAA GACAAGTACC TGGAGAACAT CGAGCAGCAG
GAGCGCCTGC AACGGCGCTG GGATGCCCGG ATCGACCTGC TGCGTCGCGG CCTGGTGCGT
AGCAGTCTGG CGGCCGAAGG CAGCGACAAG GCGGTCGACC AGTGCATGAA GGAGCTGCGC
GAGATCCTCC GTCGCGACGA CATGGACGCC GGCCTGTCGG GCCTGATTCC GCGCCTGGAA
AAGGCCGTGC TCGACTCCGA ACAGCGCCGC CAGCAACGCA CCCAGCAGAA CATCGATGCT
CTCGGCGAAC TGGCCCAGCA GTTGCTGGCC CTGGACCTGC CGCGGGAACT GCGCAAGCCG
CTGAAGCAGT TCGCCCGCGA TATCGAGGAG CGCGCCCGGC AGTCGCGCGA GATTCCGATC
CTGCTCAGCG AGCTGAGCAG GCTGCAACGC CAGGCGCTGG CCGAGCGCAA GGGCGGCGAC
GCCGAAGACG GTCGCCCGAG CCTGTTGCAA CGCCTGTTCG GCGGCAAGGA GTCGGAAACC
GCCGCGGAGC CGAGCGCATC GGTGCCGTCC GTTGTGGCGG CAAGCAATAC ACCGATCCAA
CCGGCGGCGG CCGCGCCGTC CCTGCCGGTC GCCGAGCACG ACGAGGCGCC AGGCGGCCCG
CCGCAGCCGT TGCCCGCCAG CAGGGTCGCC GCCATCGAAA GCGCGCCAGC GGGTTGGGTC
GGGGTCGCCG AGCGTGGCGA GCCGAACCAG ATCCTGCTGG ATGAGCCTCG GGAAATCTGG
CTCGACAGCC TGCCGCTGCC GGCCGGCCTG AGCTTTAGCG AGACGCTGGA AGACGCGGGT
GCGGAGTCGC CGCCCGCAGT GCCGGCGGAC GTTGAAAGCG CGCCCGAAGC TCCGGCCACC
CCTGTGGATA ACCTCGACGG GCAGGCGGTA GACGAGGCCT ACGAACTGCC GCCGCCGATA
CCGGAGCCCG GCTACAGCGC GGTGGCGCCG CACATCGAGG CCAGCCTGCT GCGGCTGCTC
GACGGCCTGT CCCTGCCGAG CAGCCACCAG CCCCAGGCCG AGGCGCTGCG GGAGCGGATC
GATGGCAGCC TGAACTGGTA TGAGCTGGTG CCGGTACTCG ACGACCTGGC GGTGCTGGTG
CTGTCCCTGG CGGACAGTGG CCAGCGCGAC TTCGAGGAAT ACCTGCGGCA ACTCAACGAG
CGCCTGGAAA GCTTCCTCGG CCACCTGGGC GACGCCCACG CCGGCTATAC CGACGTGCTG
GACAACGCGC GCGGCTTCGA CCAATCGCTG CGTGAGCAGG TCAGCGGCCT GCAGGCCAGC
GTGCAGCAGG CGACCGACCT GAACAGCCTC AAGCTGGCGG TGGACAGCCG GCTGAACGGC
CTGCTTGCCT CCATGGACGA ACACCAGCGC GAACAGGCCG AGCACGAACA GGAGGTGTCC
GGCCGCCTGC AGGCGCTGAT GGAGCGGGTC AACAGCATGG AGCAGGATGC CAAGGCGTTC
CACAGCCACC TGGAGGACCA GCGACAGAAA GCCCTGACCG ATCCGCTGAC CGGCCTGCCC
AACCGCGCGG CGCTCAGCGA GCGCCTGGAA CAGGAGGTGG CGCGCCGGCA CCGGGATGGC
GGCGATCTGC TGCTGGCGGT GCTGGACATC GACCACTTCA AGCGGATCAA CGACGACTTC
GGCCACCTGG CCGGGGACAA GGTGCTGAAG ATCATTGCCG GCGAATTGCG CAAACGGTTG
CGCCAGGCCG ATTTCATCGC CCGTTTCGGC GGCGAGGAGT TCGTCGTCCT GCTCCCGGCA
ACGTCCCTGG AAGCCGGCCG GCAACTACTC GAACGGCTGC GCGCGGCGAT CGCCGCCTGT
CCGTTCCATT TCAAGGGCGA GCCCCTGAGC ATCACCTGTT CCGCCGGCAT CACCGCGTTC
GAAGGCAACG AGGCCGGCGA AGTGGTTTTC GAGCGCGCCG ACCAGGCGCT GTATCGAGCC
AAGCGCGCCG GCCGGGACCG CCTGGAAGTG GCCTGA
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| Protein sequence | MSRDDVQRWK DKYLENIEQQ ERLQRRWDAR IDLLRRGLVR SSLAAEGSDK AVDQCMKELR
EILRRDDMDA GLSGLIPRLE KAVLDSEQRR QQRTQQNIDA LGELAQQLLA LDLPRELRKP
LKQFARDIEE RARQSREIPI LLSELSRLQR QALAERKGGD AEDGRPSLLQ RLFGGKESET
AAEPSASVPS VVAASNTPIQ PAAAAPSLPV AEHDEAPGGP PQPLPASRVA AIESAPAGWV
GVAERGEPNQ ILLDEPREIW LDSLPLPAGL SFSETLEDAG AESPPAVPAD VESAPEAPAT
PVDNLDGQAV DEAYELPPPI PEPGYSAVAP HIEASLLRLL DGLSLPSSHQ PQAEALRERI
DGSLNWYELV PVLDDLAVLV LSLADSGQRD FEEYLRQLNE RLESFLGHLG DAHAGYTDVL
DNARGFDQSL REQVSGLQAS VQQATDLNSL KLAVDSRLNG LLASMDEHQR EQAEHEQEVS
GRLQALMERV NSMEQDAKAF HSHLEDQRQK ALTDPLTGLP NRAALSERLE QEVARRHRDG
GDLLLAVLDI DHFKRINDDF GHLAGDKVLK IIAGELRKRL RQADFIARFG GEEFVVLLPA
TSLEAGRQLL ERLRAAIAAC PFHFKGEPLS ITCSAGITAF EGNEAGEVVF ERADQALYRA
KRAGRDRLEV A
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