| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_72410 |
|---|
| Symbol | |
|---|
| ID | 4385155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6450236 |
|---|
| End bp | 6450829 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639328434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_793963 |
|---|
| Protein GI | 116053636 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.140736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGT TCGGCGTCGC CGTCCTGATC TTTCTGGTCA CCGATCCCTT CGGCAACATC
GCCGTGTTCC TCGCCGCGCT GAAAGGCGTC GCCCCCGGGC GCCGCCTGCG CGTGGCGTTT
CGCGAGCTGG CCTTCGCCCT GGGCCTGCTG CTGCTCTTCC TCACCCTCGG CGAGCACATC
CTCAGCGGCC TCGGCCTGTC CCGCGAGGCG ACCGGGATCG CGGGTGGCAT CATCCTGTTC
GTGATCGCCA TGCGCCTGAT CTTCCCCTCG CCCCAAGGGC TGCTCGGCGA AGTGCCCGAC
GGCGAGCCGC TGCTGGTGCC CCTGGCCACC CCGGCGGTGG CCGGGCCCTC GGCGCTGGCG
ATGCTGATCA CCCTGCGCAC CACCTTCGAC GGTCCGCTGT GGGAGCTTTA CCTGGCGGTG
GTGCTGGCCT GGGCCGCTAC TGCGCTGATC CTGCTGCAGG CGGCGTTCCT CCAGCGTTTC
CTCGGCCCGC GCGGGCTGAC CGCCATCGAG CGCCTGGCCG GCATGCTGCT GATCATGCTC
AGCGTCGATA TGCTGTTGGA CAACCTGCGC AGCGTGTTGC ACATCGCCGC CTGA
|
|---|
| Protein sequence | MDMFGVAVLI FLVTDPFGNI AVFLAALKGV APGRRLRVAF RELAFALGLL LLFLTLGEHI
LSGLGLSREA TGIAGGIILF VIAMRLIFPS PQGLLGEVPD GEPLLVPLAT PAVAGPSALA
MLITLRTTFD GPLWELYLAV VLAWAATALI LLQAAFLQRF LGPRGLTAIE RLAGMLLIML
SVDMLLDNLR SVLHIAA
|
|---|
| |