Gene PA14_72170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_72170 
Symbol 
ID4385001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6429771 
End bp6431075 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content67% 
IMG OID639328416 
Productputative citrate transporter 
Protein accessionYP_793945 
Protein GI116053618 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.548701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC TGCTCGCCTT CGCCATGGTG GCGACCTTCA TGTTCCTGAT CATGACCAAG 
CGCCTGTCCG CGCTGATCGC GCTGATCCTG GTCCCGATCG CCTTCGCCCT GATCGGCGGT
TTCGCCGCCG GCCTCGGCCC GATGATGCTC GACGGCATCC GCACCCTGGC GCCGACCGGG
GTGATGCTGA TGTTCGCGAT CCTCTACTTC GCCATCATGA TCGACTCCGG GCTGTTCGAC
CCGGCGGTGC GCAAGATCCT CCGGCTGGTC AAGGGCGACC CGCTGAAGGT CTCGCTGGGC
ACCGCGGCGC TGGCGATGAT CGTCTCCCTC GACGGCGACG GCTCGACCAC CTACATGATC
TGCGTGGCCG CCGTGCTGCC GTTGTACAGC CGCCTGGGCA TGAGCCCGCT GGTGATGGCC
TGCCTGATCA TGCTCTCCAG CGGCGTGCTC AACATGACCC CCTGGGGCGG CCCGACCGCA
CGCGCGGCGA GCGCCCTGCA CGTCGACCCG GCGGATATCT TCGTGCCGAT GATCCCGGCG
ATGATCGCCG GGCTGCTGGC GATCTTCGCC ATCGCCTGGA TCTACGGCAA GCGCGAGCGC
GCCCGCCTCG GCGAGCTGCA CCTGCCCACC GACCACGAGG ACCTGGCGGA GATCAGCGTG
TCGCAGTATC CGGAGGCGCG CCGGCCCAGG CTGCTGTGGT TCAACGCCAT TCTCACCGTG
GTCCTGATGG CGACCCTGAT CGCCGGCCTG CTGCCGATGC CGGTGCTGTT CATGATCGCC
TTCGGCATCG CCATGATCGT CAACTACCCG TGCATCCAGG AGCAGAAGAA GCGCATCGGC
GCACACGCCG AGAACATTCT CGCGGTGGTC TCGCTGATCT TCGCCGCCGG GGTGTTCACC
GGCATCCTCT CCGGCACCGG GATGGTCGAC GCCATGTCCA AGAGCCTGCT GGCGGTGATC
CCGCCGGCGC TGGGCCCATA CCTGGCGACC ATCACCGCGC TGGTGAGCAT GCCGTTCACC
TTCTTCATGT CCAACGACGC CTTCTACTAC GGCGTCCTGC CGATCCTCAC CCAGGCCGCC
GCCGAATACG GCATCACCCC GGTGGAAATG GCCCGCGCCT CGATCGTCGG CCAGCCGGTG
CACCTGCTCA GCCCGCTGGT GCCCTCCACC TACCTGCTGG TGGGGCTGGC CAAGATCGAC
TTCGGCGACC ACCAGCGCTT CACCCTGAAA TGGGCCGTGC TGGTGTGCCT GGCAATCCTC
GCCATGGCCC TGCTGCTGGG CCTGTTCCCC CTGTTCAGTA ACTGA
 
Protein sequence
MLTLLAFAMV ATFMFLIMTK RLSALIALIL VPIAFALIGG FAAGLGPMML DGIRTLAPTG 
VMLMFAILYF AIMIDSGLFD PAVRKILRLV KGDPLKVSLG TAALAMIVSL DGDGSTTYMI
CVAAVLPLYS RLGMSPLVMA CLIMLSSGVL NMTPWGGPTA RAASALHVDP ADIFVPMIPA
MIAGLLAIFA IAWIYGKRER ARLGELHLPT DHEDLAEISV SQYPEARRPR LLWFNAILTV
VLMATLIAGL LPMPVLFMIA FGIAMIVNYP CIQEQKKRIG AHAENILAVV SLIFAAGVFT
GILSGTGMVD AMSKSLLAVI PPALGPYLAT ITALVSMPFT FFMSNDAFYY GVLPILTQAA
AEYGITPVEM ARASIVGQPV HLLSPLVPST YLLVGLAKID FGDHQRFTLK WAVLVCLAIL
AMALLLGLFP LFSN