| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_72000 |
|---|
| Symbol | rmd |
|---|
| ID | 4384949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6416997 |
|---|
| End bp | 6417911 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639328402 |
|---|
| Product | oxidoreductase Rmd |
|---|
| Protein accession | YP_793931 |
|---|
| Protein GI | 116053604 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCAGC GTCTGTTCGT CACCGGGCTC TCCGGTTTCG TAGGCAAGCA TCTTCAAGCT
TATCTGGCAG CGGCCCACAC GCCGTGGGCG CTCCTTCCCG TACCGCATCG TTACGATCTG
CTGGAGCCGG ATTCGCTGGG CGACCTCTGG CCGGAGCTGC CGGATGCGGT CATCCACCTG
GCCGGGCAGA CCTATGTGCC GGAGGCCTTC CGCGATCCTG CGCGGACCCT GCAGATCAAC
CTCCTTGGCA CCCTGAACCT GCTCCAGGCG CTTAAGGCGC GGGGCTTCTC CGGTACCTTC
CTGTACATCA GCTCCGGCGA CGTCTACGGC CAGGTGGCCG AGGCGGCGTT GCCGATCCAC
GAGGAACTCA TCCCCCACCC GCGCAATCCC TATGCGGTCA GCAAGCTGGC GGCCGAGTCG
CTGTGCCTGC AGTGGGGTAT CACCGAAGGC TGGCGGGTGC TGGTGGCGCG GCCGTTCAAC
CATATCGGGC CGGGGCAGAA GGACAGCTTC GTGATCGCCA GCGCCGCGCG GCAGATCGCC
CGGATGAAGC AGGGCTTGCA GGCCAATCGG CTGGAAGTGG GGGACATCGA CGTCAGCCGT
GATTTCCTCG ATGTCCAGGA CGTGCTGTCA GCCTATCTGC GCCTGCTCTC CCACGGCGAG
GCGGGCGCCG TCTATAACGT CTGTTCCGGG CAGGAGCAGA AGATTCGCGA GCTGATCGAA
CTGCTGGCGG ACATCGCCCA GGTCGAGCTG GAAATCGTTC AGGACCCTGC CCGGATGCGC
CGGGCGGAAC AGCGTCGGGT TCGCGGCAGC CATGCGCGAC TGCATGACGC CACGGGCTGG
AAGCCTGAAA TAACCATAAA ACAGTCCCTG CGGGCGATCC TGTCCGACTG GGAGTCACGG
GTACGAGAAG AATGA
|
|---|
| Protein sequence | MTQRLFVTGL SGFVGKHLQA YLAAAHTPWA LLPVPHRYDL LEPDSLGDLW PELPDAVIHL
AGQTYVPEAF RDPARTLQIN LLGTLNLLQA LKARGFSGTF LYISSGDVYG QVAEAALPIH
EELIPHPRNP YAVSKLAAES LCLQWGITEG WRVLVARPFN HIGPGQKDSF VIASAARQIA
RMKQGLQANR LEVGDIDVSR DFLDVQDVLS AYLRLLSHGE AGAVYNVCSG QEQKIRELIE
LLADIAQVEL EIVQDPARMR RAEQRRVRGS HARLHDATGW KPEITIKQSL RAILSDWESR
VREE
|
|---|
| |