| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_71970 |
|---|
| Symbol | wbpW |
|---|
| ID | 4384947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6414586 |
|---|
| End bp | 6416025 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639328400 |
|---|
| Product | GDP-mannose pyrophosphorylase |
|---|
| Protein accession | YP_793929 |
|---|
| Protein GI | 116053602 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTC CCGTGGTGCT TTCCGGCGGC GCCGGTACCC GCCTGTGGCC GGTGTCGCGT
GAAGGACAGC CGAAGCCGTT CATGCGCCTG CCCGATGGCC AGACCCTGCT GGGCAAGACC
TACCGACGTG CCGCCGGGCT CCTGGCCGGG CATGGCGAAA TCGTCACGGT GACCAACCGC
GAGCATTACT TCCAGAGCAA GGACCAGTTC CAGGCAGCCC GCCTGGGGCG GCACCGAGGA
CATTTCATCC TCGAACCGAC CGGGCGCAAC ACCGCTCCGG CGATTGCCGT CGCCGCCCTG
GCGCTGCAAG CCGAACATGG CGACGCGGCG GTACTGGTGG TGATGCCGGC GGATCACCTG
ATCCGCAACG AGGAGGCCTT CCGCGAGGCG GTAGGGCATG CCGCGCGTCT CGCCGTCGCC
GGGCACCTGG TTACCTTCGG CGTGGTGCCG GACGCAGCGG AAACCGGTTT CGGCTATATC
GAGCTGGGCG ACCGGCTGGA CGAGCAGGGG GCGGCCAAGG TGCGCCGCTT CGTCGAGAAA
CCCGATGAGG AAACCGCCCG TCGCTACGTA GAAAGTGGCG GTTTCCTGTG GAATTCCGGG
ATGTTCTGTT TCACGGCCTC GACCCTGGTC GACGAGCTGG CGCAGCATGC CCCGGCCCTG
CTGGAGCAGG CCAGGGCCTG CCTGGCCGCC AGTGCGGCGG TGAAGATGGC CGATGGCATC
CAGCATGAGC TGGCAGGCGA AGCCTTCGCC GCGCTGCCGG ACATTTCCAT CGACTATGCG
CTGATGGAGC GCTCCGCGCG GGTCGCTGTG GTGCCGGCGG CCTTCGACTG GAGCGATATC
GGTTCCTGGG GCGCGATGAG CGCGCTGCTC GACGCGGACG CAGAGGGCAA TCGCGGCAGC
GGCGACACCC TGTTCGTCGA CACCCGTAAC ACCTTCGTGC AGAGCGACGG GCGCCTGGTC
GCCACGGTCG GGGTCGACGA CCTGGTCGTG GTGGATACTT CCGATGCGCT GCTGATCGCC
CGCGCCGACC GGGTCCAGGA GGTGCGCAGG GTGGTGCAGC GGTTGAAGGA CGAGCGGCAC
GAGGCCTATC GGCTGCATCG GACCGTCAAC CGTCCCTGGG GCAGCTATAC CGTCCTCGAG
GAAGGGCCGC GCTTCAAGAT CAAGCGAATC GTGGTCAGGC CGGGAGAGCG CTTGTCGCTG
CAGATGCACC ATCACCGCAG CGAGCACTGG ATCGTGGTGC AAGGCATGGC CAGGGTCACC
AATGGCGATG GCGCGCGGCT GGTCAACAGC AACGAGTCGA CCTACATTCC CGCGGGCCAC
CGGCATCGCC TGGAAAACCC GGGGGTCATC GACCTGGTGA TGATCGAGGT GCAGAGCGGC
GAATACCTGG GAGAGGACGA CATCGTCCGC TTCGAGGACC AGTACGGCAG GGTGGTCTGA
|
|---|
| Protein sequence | MLIPVVLSGG AGTRLWPVSR EGQPKPFMRL PDGQTLLGKT YRRAAGLLAG HGEIVTVTNR
EHYFQSKDQF QAARLGRHRG HFILEPTGRN TAPAIAVAAL ALQAEHGDAA VLVVMPADHL
IRNEEAFREA VGHAARLAVA GHLVTFGVVP DAAETGFGYI ELGDRLDEQG AAKVRRFVEK
PDEETARRYV ESGGFLWNSG MFCFTASTLV DELAQHAPAL LEQARACLAA SAAVKMADGI
QHELAGEAFA ALPDISIDYA LMERSARVAV VPAAFDWSDI GSWGAMSALL DADAEGNRGS
GDTLFVDTRN TFVQSDGRLV ATVGVDDLVV VDTSDALLIA RADRVQEVRR VVQRLKDERH
EAYRLHRTVN RPWGSYTVLE EGPRFKIKRI VVRPGERLSL QMHHHRSEHW IVVQGMARVT
NGDGARLVNS NESTYIPAGH RHRLENPGVI DLVMIEVQSG EYLGEDDIVR FEDQYGRVV
|
|---|
| |