Gene PA14_71940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71940 
Symbolwzt 
ID4384945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6412524 
End bp6413789 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID639328398 
ProductABC subunit of A-band LPS efflux transporter 
Protein accessionYP_793927 
Protein GI116053600 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGA TACGCGTATC CGGCCTCGGC AAGGCCTACA AGCAGTATCC CAATCGCTGG 
AGCCGGTTGT TCGAATGGCT GGTGCCTTTC AGCCCTCCGC GCCACCACCT GCACTGGATC
CTGCGCGAGG TCGAGTTCAC CATCGAGCCG GGCGAAGCGG TCGGCATCGT CGGGGTCAAC
GGCGCCGGCA AGAGCACCCT GCTGAAGATG ATCGCCGGCA CCACCCAGCC GACCTGCGGC
GAGATCCGCG TGGCCGGCCG GGTCGCCGCG CTGCTCGAGC TGGGCATGGG CTTCCACCCG
GACTTCACCG GCCGGCAGAA CGTCTTCATG GCCGGGCAAC TGCTGGGCAT GCAGGTCGAG
GAAATCCAGG CGCTGATGCC GGAGATCGAG GCCTTCGCCG AAATCGGCGA GGCCATCGAG
CAACCGGTGC GCACCTACTC CAGCGGCATG CAGATGCGCC TGGCGTTCAG CGTGGCGACT
GCCCGGCGGC CGGACATCCT GATCGTCGAC GAGGCCCTGT CGGTTGGCGA TGCCTATTTC
CAGCACAAGA GCTTCGAGCG CATCCGCAGT TTCCGCAAGG CCGGCACCAC CCTGCTGATC
GTTTCCCACG ACCGCTCGGC GATCCAGTCC ATCTGCGACT CCGCGATCCT CCTGGAGCAG
GGACGGATGG CCATGCGCGG GCGGCCGGAA GAGGTGATGG ACTACTACAA CGCCCTGCTC
GCCGAGCGCG AGGGGCAGAC CGTGCGCCAG GAAATGCTCG CCGACGGCCA GGTGCGGACG
ATTTCCGGCA CCGGCGAGGC AGCGATCCTC GACGTACGGA TGGTCGACCA GCGGCAGCGC
GCGCTGGAGG TGGTCGAGGT AGGCCAGGCG GTGACGCTGG AAGTCGAAGT CGAGGTTCGC
CAGGACATCG AGCGGCTGAT CCTCGGCTTC ATGATCAAGG ACCGCCTCGG CCAGCCGATG
TACGGGATCA ATACCCACCG CCTGGACAAG GCCCTCACCG ACCTGAAGGC CGGCGAGCGC
ATCACCTACC GCTTCGCCTT CGACATGCGC CTGGGCAAGG GGCACTACTC GGTGGCGCTG
AGCCTGTCGC GGCTGGACTC GCACCTGGAC CGCAACTTCG AATGGCGCGA CTACGGCCTG
GTCTTCCATG TCATCAACAA CCGCCAGGAA GACTTCGTCG GTTGCTCCTG GCTGGGCGCC
GAAACCCATA TCAGCCGCTC CGGCGAGGCG GCTCTGGACC CCACTTCCGC GGAGAGCACT
CCATGA
 
Protein sequence
MGQIRVSGLG KAYKQYPNRW SRLFEWLVPF SPPRHHLHWI LREVEFTIEP GEAVGIVGVN 
GAGKSTLLKM IAGTTQPTCG EIRVAGRVAA LLELGMGFHP DFTGRQNVFM AGQLLGMQVE
EIQALMPEIE AFAEIGEAIE QPVRTYSSGM QMRLAFSVAT ARRPDILIVD EALSVGDAYF
QHKSFERIRS FRKAGTTLLI VSHDRSAIQS ICDSAILLEQ GRMAMRGRPE EVMDYYNALL
AEREGQTVRQ EMLADGQVRT ISGTGEAAIL DVRMVDQRQR ALEVVEVGQA VTLEVEVEVR
QDIERLILGF MIKDRLGQPM YGINTHRLDK ALTDLKAGER ITYRFAFDMR LGKGHYSVAL
SLSRLDSHLD RNFEWRDYGL VFHVINNRQE DFVGCSWLGA ETHISRSGEA ALDPTSAEST
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