| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_71850 |
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| Symbol | |
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| ID | 4384937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 6400979 |
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| End bp | 6403831 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639328390 |
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| Product | hypothetical protein |
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| Protein accession | YP_793919 |
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| Protein GI | 116053592 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.906851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC ATGTCGAGCC CTTGGCGCTG CCGGGCGGCA GCACCGATGT ACTGCGGCTC
TACGCCCGCG AAATTGCCAT CGAGCGTACC CGGCTCCTTT ATCTCGGCTC GCGCACGCCG
ACCCTGCTCA TGCTGCTCGG CGGCGTGACC AGCGCCTGCC TGGTGTGGGG CAAGGTCAGC
AGCTGGCTGC TCGGTGGCTG GCTGGTCTGG CTGGTGTTGC TCGCCGTCCT GCGCCTGCTG
CAGGTCGCCG CCTTCCAGCA GGCCGACAGC CGTCGCCAGG CCAGCCGCCA CTGGCGGCGG
ACCTTCCTGT GCGGCGCCGG CGCCTCGGGC CTGACCCTGG CGTTCGCGGT GATCATGCTG
GTCCCGGCCG ATGCCTTCCT CCAGCAGGTG CTGGTGTTCG GCCTGGTGGC GGCGGCGATC
CTCTCCGCCA GCGTCGCCTA TGCGGTGAGC CTGCCGGCCT TCCTCACCTT CGCCTTGCCG
GGCCTGCTGC CATCCATCGT TTTCCTGCTG TTACAGCCGC ATAGCCTGTT GCAGGGCTGG
GGCGTGCTCG GCCTGATCCT GCTGGTGGCG CTGCTGGTGG TCGCCGGGCA GATCCACCGG
CTGGTGCAGG GCGCGCTGCT GCGACGCTTC CAGACCCAGG CGCTGAACCT GCACCTGGAG
CGCGTCAACG CCGAGGCCGA AGCGCTCAAT CGCAAGCTCG CCCAGGAGGT CGGCCAGCGA
CGCCTGGTCG AACGCGAGCT GCGCGCCGCC CGCGATGCCT TGCAGCGCCG GGTGGAGGCG
CGCACCGAGG AGCTTGGCGC GACCAGCCAG GCGCTCAGCC AGAGCGAGGC GCGCCTGGCC
ATGGCCCTGG AGGCCAGCGA ACTGGGGTTG TGGGACTGGA ACCTGGAGAG CGGCCGGGTC
CAGCATTCCT ATCTCGAGGC GGTCTTCAGC GCCGGGGACG GTCCCGAGGA CTATCGCAGG
CTGATCGAAA GCATCCACCC CGGCGACCTG CCGCGTATCC GTCGCGCCCT CGCCGAACAT
CTCAAGGGGC GCAGCGAGCT GTACCGGGTG GAGTACCGCG TGCGCGACCG GGAGGGCGGC
TGGCGCTGGC TGGAGGATCG TGGCCGGGCC ATGGCTCGCG ACCCGCGGGG ACGGGTGACG
CGGATGCTCG GCACGCGCAG CGACATCAGC GCGCGCAAGC GCCTGGAAGA GCAGCAGCAA
CTGGCCGCGA CAGTGTTCGA GGCGGCCAGC GAGAGCATCG TGATCCTCGA TCCGGCCTAC
AACCTGCTGG CGGTCAACCA GGCCTTCAGT CGCATCACCG GCTATCGCCG CGAGGACGTG
GTCGGGCGCA ACGCCAGCCT GCTGGTGAAT ACCCCCGAGG CCCAGCGCCA CTACCGGCAG
ATCCGCGCCG AGCTGCGCCA GCACGGGCAG TGGCAGGGCG AACTGGTGGA TACGCGGAAG
AATGGCGATC CCTATCCCCA ATGGCTGCAG CTCAACCTGC TGCGCGACGG CAATGGCGAG
GCGACCCACA TCGTCGGTTT CTTCACCGAT CTCAGTGCCC GCCGCGACGT CGAGGAGCGC
CTGCGTCACC TGCTGCACTA CGACGAACTG ACCGGCCTGG CCAACCGCCG GTTGTTCCGC
GAGCGGCTGC ACGAGGCGGC CCAGCGGGCG CGCCAGGAGG AGGGCGGGCT GGCCCTGCTG
CTGATCGACC TGGACCGCTT CAAGCTGCTC AACGACAGCC TCGGCCACGA GGTCGCCGAC
CAGTTGCTCA GGGAGATGGC CCAGCGCCTG CGGCGCACCG CGCCGGAAGC CAACACCCTG
GCGCGTCTGG CCGGCGACGA GTTCGCCATT CTCCTCGATG GCGGCACCGG CACCGCGGCC
CTGTCGCGCC TGGCCGAACG CCTGCTGGTC CAGTTGCGCC AGCCGGTGAG CGTGCTCGGC
CACGAGTTGA TCCTCGGCGC CTCGCTGGGG ATCAGCCTGT TTTCCGAGCA AGCACGGGAA
ATCTCCGTGC TGATGAGCCA GGCGAACCTG GCGATGCAAC ATGCCAAGCA ACTCGGCGGC
AATACCTTCC AGTTCTTCCG CGACAACCTG CAGGACAGCA CCCTCGAACG CCTGCGCCTG
GAAACCCGGT TGCGCAAGGC GGTCGAGGAG GGCCAGCTGG ACGTGCATTA CCAGCCCAAG
CTGTGCCTGG CCAGCGCCCG CCCGGACTCG GTCGAGGCGC TGGTGCGCTG GCACCATCCG
GAGGAGGGCA TGATCCCGCC GTCGACCTTC ATCGGCCTCG CCGAGGAGTG CGGGTTGATC
GGCGAGATCG GTGAATTCGT CCTGCGCCGG GCCTGCCTGC AGGCCGCCGA GTGGAGCCAG
CGGGGCCTGA ACCTGCGGGT CTCGGTGAAC CTCTCGGTCC ACCAGTTGCG CCAGGGCGAC
CTGCTCGACG TAGTGCGCTC GGCGCTGGCC GACAGCGGCC TGCCGGCGGC GCAACTGGAG
CTGGAGTTGA CCGAAAGCCA GTGGCTGGAC GCCCTCGATA GTGTCCTGGC GACCTTCCGC
CAGTTGCGCG AGATGGGGGT GAAGCTATCG GTCGACGACT TCGGCACCGG CTATTCCTCG
CTCAGCTACC TGAAGCGCCT GCCGCTGGAC TACCTGAAGA TCGACCAGTC GTTCGTCCGC
GACCTGACCC AGAACAGCGA GGATGCGGCG ATCATCCGGG CGATCATCGC CATGGCCCAC
AGCCTCGACC TGAAGGTGGT CGCCGAAGGC GTGGAAACCA TCGAACAGCG GGACTTCCTG
GTGGCCCAGC GTTGCGATGA GCTGCAGGGC TACCTGATCG GCCGGCCGTT GCCGGCCCAT
GCCCTGGAGG AAGGTTTGCG CCAGGCTCGT TGA
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| Protein sequence | MTVHVEPLAL PGGSTDVLRL YAREIAIERT RLLYLGSRTP TLLMLLGGVT SACLVWGKVS
SWLLGGWLVW LVLLAVLRLL QVAAFQQADS RRQASRHWRR TFLCGAGASG LTLAFAVIML
VPADAFLQQV LVFGLVAAAI LSASVAYAVS LPAFLTFALP GLLPSIVFLL LQPHSLLQGW
GVLGLILLVA LLVVAGQIHR LVQGALLRRF QTQALNLHLE RVNAEAEALN RKLAQEVGQR
RLVERELRAA RDALQRRVEA RTEELGATSQ ALSQSEARLA MALEASELGL WDWNLESGRV
QHSYLEAVFS AGDGPEDYRR LIESIHPGDL PRIRRALAEH LKGRSELYRV EYRVRDREGG
WRWLEDRGRA MARDPRGRVT RMLGTRSDIS ARKRLEEQQQ LAATVFEAAS ESIVILDPAY
NLLAVNQAFS RITGYRREDV VGRNASLLVN TPEAQRHYRQ IRAELRQHGQ WQGELVDTRK
NGDPYPQWLQ LNLLRDGNGE ATHIVGFFTD LSARRDVEER LRHLLHYDEL TGLANRRLFR
ERLHEAAQRA RQEEGGLALL LIDLDRFKLL NDSLGHEVAD QLLREMAQRL RRTAPEANTL
ARLAGDEFAI LLDGGTGTAA LSRLAERLLV QLRQPVSVLG HELILGASLG ISLFSEQARE
ISVLMSQANL AMQHAKQLGG NTFQFFRDNL QDSTLERLRL ETRLRKAVEE GQLDVHYQPK
LCLASARPDS VEALVRWHHP EEGMIPPSTF IGLAEECGLI GEIGEFVLRR ACLQAAEWSQ
RGLNLRVSVN LSVHQLRQGD LLDVVRSALA DSGLPAAQLE LELTESQWLD ALDSVLATFR
QLREMGVKLS VDDFGTGYSS LSYLKRLPLD YLKIDQSFVR DLTQNSEDAA IIRAIIAMAH
SLDLKVVAEG VETIEQRDFL VAQRCDELQG YLIGRPLPAH ALEEGLRQAR
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