Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_71640 |
Symbol | |
ID | 4385017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6381099 |
End bp | 6382007 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639328374 |
Product | LysR family transcriptional regulator |
Protein accession | YP_793903 |
Protein GI | 116053576 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.182655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTCG AACTGAAGTG GCTGGAGGAT TTCATCGCCC TGGCCGGCAC CCGCAGCTTT TCCCAGGCGG CGGAGAAGCG CTTCGTCACC CAGCCGGCCT TCAGCCGGCG CATCCGCAGC CTGGAGGACG CCCTCGGCCT GACCCTGGTG AATCGCCAGC GCACGCCGGT GGAACTGACC GAGGCCGGGC AGCTGTTCCT GGTCACCGCG CGCAGCGTGG TCGAGCAGCT CGGCCAGGTG GTGCGCCACC TGCACCACCT GGAAGGCGGG CAGGGCGAGG TGCTGCAGTT CGCCGCCGCC CACTCGCTGG CGCTGGGCTT CTTCCCGCAG TGGATCGCGC GGCTGCGCAA CGAGGGGCTG AACATCGCCA GCCGGCTGAT CGCCACCAAC GTCGGCGAGG CGGTGCATTC CCTGCGCGAG GGTAGCTGCG ACCTGATGCT GGCGTTCTAC GACCCTGACG CCGCGTTGCA GATGGACCCG GAGATCTTCC CCTCGCTGCA CCTGGGGCGC ACCGAGATGC TGCCGGTCTG CGCGGTGAAC GCCGAGGGCC TGCCGCTGTT CGACCTGGAG AACGGCCAGA GCGTGCCGCT GCTCGCCTAC AGCGCCAGCG CCTTCCTCGG TCGCGGGGTC AACCTGCTGC TGCGCCAGCG CAACCTGCGC TACACCACGG TCTACGAGAC GGCGATGGCC GACAGCCTGA AGAGCATGGC GCTGCAAGGC ATGGGCGTGG CCTGGGTGCC ACGGCTGAGC GTGGTCAACG AACTGGAGCG CGGCGAACTG GCGATCTGTG GCGGGCCGCA ATGGTTCGTG CCGCAGGAAA TCCGCCTGTA CCGCTGCGCG CTGGTGCGCA AGGCGGCGAT CCGCCTGCTC TGGCGCAAGC TGGAAGGCGG GCTGGGCAGC GTCGAGTAG
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Protein sequence | MNLELKWLED FIALAGTRSF SQAAEKRFVT QPAFSRRIRS LEDALGLTLV NRQRTPVELT EAGQLFLVTA RSVVEQLGQV VRHLHHLEGG QGEVLQFAAA HSLALGFFPQ WIARLRNEGL NIASRLIATN VGEAVHSLRE GSCDLMLAFY DPDAALQMDP EIFPSLHLGR TEMLPVCAVN AEGLPLFDLE NGQSVPLLAY SASAFLGRGV NLLLRQRNLR YTTVYETAMA DSLKSMALQG MGVAWVPRLS VVNELERGEL AICGGPQWFV PQEIRLYRCA LVRKAAIRLL WRKLEGGLGS VE
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