| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_71500 |
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| Symbol | soxA |
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| ID | 4380602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6369948 |
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| End bp | 6372965 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639328364 |
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| Product | sarcosine oxidase alpha subunit |
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| Protein accession | YP_793893 |
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| Protein GI | 116053566 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA TCAATCGCCT GTCCAGCGGC GGCCGCATCG ACCGCAACCG CCCGCTGACC
TTCAGCTTCA ACGGCCAGCA CTACCAGGGC TATGCCGGCG ACACCCTGGC CGCCGCGCTG
CTGGCCAACG GCGTCGACAT CGTCGGCCGC AGCTTCAAGT ACTCGCGGGC GCGCGGCATC
GTCGCCGCCG GCGCCGAGGA GCCCAACGCG ATCCTGCAGA TCGGCTCCCG CGAAGCCACC
CAGATCCCCA ACGTGCGCGC CACCCAGCAG GCGCTCTACG GCGGCCTGGT GGCCACCAGC
ACCAACGGCT GGCCGAATGT GCAGAACGAC CTGATGGGAA TCTTCGGCAA GGTCGGCGGC
AAGCTGATGC CGCCCGGTTT CTACTACAAG ACCTTCATGT ACCCGCAGTC GATGTGGATG
ACCTACGAGA AGTACATCCG CAAGGCCGCC GGCCTGGGCC GCGCGCCGAC CGAGGTCGAT
CCGGACAGCT ACGACTGGAT GAACCACCAC TGCGACGTGC TGGTGGTCGG CGCCGGCCCG
GCCGGCCTGG CCGCCGCCCT CGCCGCCGCT CGCAGCGGCG CGCGGGTGAT TCTCGCCGAC
GAGCAGGAAG AGTTCGGCGG CAGCCTGCTG GACACCCGCG AGACCCTCGA CGGCAAGCCC
GCCGCCGAGT GGGTCGCGGA CGCCGTGGCC GAGCTGCAAG GCCTGCCGGA AGTCATCCTG
CTACCGCGCT CCACGGTCAA CGGCTACCAC GACCACAACT TCCTCACCAT CCACGAACGG
CGCACCGACC ACCTCGGCGA GGTCGCCCCG CTCGGCCAGG TCCGCCAGCG CGTGCACCGC
GTACGCGCCA AGCGCGTGGT ACTGGCCGCC GGCGCCCATG AGCGGCCGCT GGTCTACGGC
AACAACGACC TGCCCGGCAA CATGCTCGCC GGCGCGGTTT CCACCTATGT ACGGCGCTAC
GGCGTGGCAC CGGGCAAGAA ACTGGTGCTG GCCACCAACA ACGACTACGC CTACCGCGTC
GCCCTCGACT GGCAGGAAGC CGGCCTGCAA GTGGTGGCCA TCGCCGACGC CAGGGCCAAT
CCGCGCGGCG AGTGGGTCGA GGAAGCACGC CAACGCGGTA TGCGGGTGAT CACCGGCAGT
TCGGTGATCG AGGCTCGCGG CGGCAAGCGG GTCAGCGGCG CCAAGGTCGC CCGGATCGAC
TTGCAGGCCA TGCGCGCCAG CGGCGGCGAA TGGCTGGACT GCGACCTGAT CGCCAGCTCC
GGCGGCTACA GCCCGGTCGT GCACCTGGCC TCGCACCTGG GCGGCAAGCC GGAATGGCGC
GAGGAAATCC TCGCCTTCGT CCCCGGCGAA GGCCTGCAGA AACGCATCTG CGCCGGCGCC
GTGAACGGCG TGTTCGGGCT CGCCGAGGTG CTCGCCGACG GCTACCAGGC CGGGAGCCGC
GCCGCCCTCG ACGCCGGCTA CAAGACCGCC GCCGGCAGCC TGCCGAAGGT CCAGCCGCGC
CGCGAGGAAG CGTCCGTCGC GCTGTTCCAG GTGCCCCACG AGAAGCCCAC GGCACGCGCA
CCGAAGCAGT TCGTCGATCC GCAGAACGAC GTCACCGCCG CCGCCATCGA ACTGGCCTGC
CGCGAGGGCT TCGAGTCCAT CGAGCACGTC AAGCGCTACA CCGCGCTGGG CTTCGGCACC
GACCAGGGCA AGCTGGGCAA CATCAACGGC CTGGCGATCG CCGCGCGGGC CCAGGGCAAG
AGCATCGCCG ACACCGGCAC CACCATGTTC CGTCCGAACT ACACCCCGGT GACCTTCGGC
GCCGTCGCCG GCCGCCACTG CGGGCACCTG TTCGAACCGG TGCGCTTCAC CGCCCTGCAC
GCCTGGCACG TGAAGAACGG CGCCGAGTTC GAAGACGTCG GCCAGTGGAA GCGGCCGTGG
TACTTCCCGC GCCGCGGCGA GGACATGCAC GCCGCCGTGG CCCGCGAATG CCGCGCGGTG
CGCGAGGCGG TCGGCCTGCT CGACGCCTCG ACCCTGGGCA AGATCGACAT CCAGGGCCCG
GACGCGCGGG AGTTCCTCAA CCGGGTCTAC ACCAACGCCT GGACCAAGCT CGACGTCGGC
AAGGCGCGCT ACGGCCTGAT GTGCAAGGAA GACGGGATGG TCTTCGACGA CGGCGTGACC
GCCTGCCTGG CCGACAACCA CTTCGTCATG ACCACCACCA CCGGCGGCGC CGCCCGCGTA
CTGGAGTGGC TGGAGCTGTA CCACCAGACC GAATGGCCGG AGCTGAAGGT GTACTTCACC
TCGGTCACCG ACCACTACGC GACCCTCACC CTGTCCGGCC CGAACAGCCG CAAGCTGCTC
GCCGAAGTCA CCGACATCGA CCTGGACAAG GACGCCTTCC CCTTCATGAC CTGGAAGGAA
GGCAAGGTCG CCGGGGTGCC GGCGCGGGTG TTCCGCATCT CCTTCACCGG CGAGCTGAGC
TACGAGGTGA ACGTCCAGGC CGACTACGCC ATGGGCGTGC TCGAAGCGCT CGCCGAGCAC
GGTGCGAAGT ACGGCCTGAC ACCCTACGGC ACCGAGACCA TGCACGTCCT GCGCGCCGAG
AAGGGCTTCA TCATCGTCGG CCAGGACACC GATGCCTCGG TCACCCCGGA CGATCTCAAC
ATGGGCTGGG CGGTGGGCCG CAGCAAGCCG TTCTCCTGGA TCGGCTGGCG CGGCATGAAC
CGCGCCGACT GCCTGCGCGA GGATCGCAAG CAACTGGTCG GACTCAGGCC GAGCAACCCG
CAGGAGGTAC TGCCCGAAGG CGCGCAACTG GTGTTCGACA CCCAGCAGGC GATCCCGATG
AAGATGGTCG GCCACGTCAC CTCCAGCTAC ATGAGCGCCA GCCTCGGCCA CGGCTTCGCC
CTGGCGGTGG TGAAAGGCGG CCTCAAGCGC ATGGGCCAGA AGGTCTACGC GCCGCTGGCG
GACGGCCGCT TCATCGAGGC GGAGATCTGC TCCTCGGTGT TCTACGACCC CAAAGGGGAG
CGGCAGAACG TGGATTGA
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| Protein sequence | MSQINRLSSG GRIDRNRPLT FSFNGQHYQG YAGDTLAAAL LANGVDIVGR SFKYSRARGI
VAAGAEEPNA ILQIGSREAT QIPNVRATQQ ALYGGLVATS TNGWPNVQND LMGIFGKVGG
KLMPPGFYYK TFMYPQSMWM TYEKYIRKAA GLGRAPTEVD PDSYDWMNHH CDVLVVGAGP
AGLAAALAAA RSGARVILAD EQEEFGGSLL DTRETLDGKP AAEWVADAVA ELQGLPEVIL
LPRSTVNGYH DHNFLTIHER RTDHLGEVAP LGQVRQRVHR VRAKRVVLAA GAHERPLVYG
NNDLPGNMLA GAVSTYVRRY GVAPGKKLVL ATNNDYAYRV ALDWQEAGLQ VVAIADARAN
PRGEWVEEAR QRGMRVITGS SVIEARGGKR VSGAKVARID LQAMRASGGE WLDCDLIASS
GGYSPVVHLA SHLGGKPEWR EEILAFVPGE GLQKRICAGA VNGVFGLAEV LADGYQAGSR
AALDAGYKTA AGSLPKVQPR REEASVALFQ VPHEKPTARA PKQFVDPQND VTAAAIELAC
REGFESIEHV KRYTALGFGT DQGKLGNING LAIAARAQGK SIADTGTTMF RPNYTPVTFG
AVAGRHCGHL FEPVRFTALH AWHVKNGAEF EDVGQWKRPW YFPRRGEDMH AAVARECRAV
REAVGLLDAS TLGKIDIQGP DAREFLNRVY TNAWTKLDVG KARYGLMCKE DGMVFDDGVT
ACLADNHFVM TTTTGGAARV LEWLELYHQT EWPELKVYFT SVTDHYATLT LSGPNSRKLL
AEVTDIDLDK DAFPFMTWKE GKVAGVPARV FRISFTGELS YEVNVQADYA MGVLEALAEH
GAKYGLTPYG TETMHVLRAE KGFIIVGQDT DASVTPDDLN MGWAVGRSKP FSWIGWRGMN
RADCLREDRK QLVGLRPSNP QEVLPEGAQL VFDTQQAIPM KMVGHVTSSY MSASLGHGFA
LAVVKGGLKR MGQKVYAPLA DGRFIEAEIC SSVFYDPKGE RQNVD
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