| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_71470 |
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| Symbol | soxB |
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| ID | 4380600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6368287 |
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| End bp | 6369537 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639328362 |
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| Product | sarcosine oxidase beta subunit |
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| Protein accession | YP_793891 |
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| Protein GI | 116053564 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.115673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCT ACTCCGGCTT CGGCCTGTTA AAGCATTCAC TGAGCCATCA CGAGAACTGG
CAACGCATGT GGCGCACGCC CACGCCGAAG CCGGTCTACG ACGTGGTCAT CGTCGGCGGC
GGCGGGCACG GCCTGGCCAC CGCCTACTAC CTGGCCAAGG AACACGGCAT CAGCAACGTG
GCGGTAGTCG AGAAAGGTTG GCTGGGCGGC GGCAACACCG CGCGCAACAC CACCATCGTG
CGCTCCAACT ACCTGTGGGA CGAGTCCGCG CTGCTCTACG AACACGCGAT GAAGCTGTGG
GAGGGCCTGT CCCAGGACCT CAACTACAAC GTGATGTTCT CCCAGCGCGG GGTCTACAAC
CTCTGCCACA CCCTCCAGGA CATGCGCGAC GGCGAGCGCC GGGTCAGCGC CAACCGCCTC
AACGGCGTCG ACGGCGAATT GTTGAACGCG CAGCAGGTGG CGGAGGAGAT TCCCTACCTG
GACTGCAGCA AGAACACCCG CTACCCGATC ATGGGCGCGA CCATCCAGCG TCGCGGCGGC
GTCGCCCGCC ATGATGCGGT GGCCTGGGGC TTCGCCCGCG CCGCCGATGC CCTCGGCGTG
GACCTGATCC AGCAGACCGA AGTCACCGGC TTCCGCAAGC AGGACGGCGC GGTGATCGGC
GTCGAGACCA ACCGCGGCTT CATCGGCGCG CGTCGTGTCG GGGTGGTCAC CGCCGGCAAC
TCCGGGCACA TGGCCAGGCT CGCCGGCTTC CGCCTGCCGC TGGAGTCGCA CCCGTTGCAG
GCGCTGGTCT CCGAGCCGCT GAAGCCGATC ATCGACAGCG TGATCATGTC CAACGCCGTG
CATGGCTACA TCAGCCAGTC GGACAAAGGC GACCTGGTCA TCGGCGCCGG CATCGACGGC
TACAACGGCT ACGGCCAGCG CGGCTCGTAC CCGGTGATCG AGCACACCCT GCAAGCCATC
GTCGAGATGT TCCCGGTGCT CTCGCGGGTA CGCATGAACC GCCAGTGGGG CGGCATCGTC
GACACCACCC CGGACGCCTG CCCGATCATC GGCAAGACTC CGGTGCAGAA CCTGTTCTTC
AACTGCGGCT GGGGCACCGG CGGCTTCAAG GCCACTCCCG GCTCCGGAAA CGTCTTCGCC
GCCACCCTGG CCAAGGGCGA ACCGCATCCG CTGGCCGCGC CCTTCTCCAT CGAACGCTTC
CACAGCGGTG CGCTGATCGA CGAGCACGGC GCGGCGGCAG TGGCGCACTG A
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| Protein sequence | MQRYSGFGLL KHSLSHHENW QRMWRTPTPK PVYDVVIVGG GGHGLATAYY LAKEHGISNV
AVVEKGWLGG GNTARNTTIV RSNYLWDESA LLYEHAMKLW EGLSQDLNYN VMFSQRGVYN
LCHTLQDMRD GERRVSANRL NGVDGELLNA QQVAEEIPYL DCSKNTRYPI MGATIQRRGG
VARHDAVAWG FARAADALGV DLIQQTEVTG FRKQDGAVIG VETNRGFIGA RRVGVVTAGN
SGHMARLAGF RLPLESHPLQ ALVSEPLKPI IDSVIMSNAV HGYISQSDKG DLVIGAGIDG
YNGYGQRGSY PVIEHTLQAI VEMFPVLSRV RMNRQWGGIV DTTPDACPII GKTPVQNLFF
NCGWGTGGFK ATPGSGNVFA ATLAKGEPHP LAAPFSIERF HSGALIDEHG AAAVAH
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