Gene PA14_71140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71140 
Symbol 
ID4384975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6336801 
End bp6337766 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content72% 
IMG OID639328331 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_793860 
Protein GI116053533 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCG TCACCGAGAT CAAGACCTTC GCCGCCCTCG GTAGCGGCGT CATCGGCAGC 
GGCTGGATCG CCCGCGCCCT GGCCCACGGC CTCGACGTCG TCGCCTGGGA TCCGGCGCCG
GGCGCCGAAG CGGCGTTGCG CGCGCGCGTC GCCAATGCCT GGCCGGCCTT GCGGAAACAG
GGCCTGGCGC CCGGCGCGGC GCAGGAACGC CTGCGCTTCG TCGCGAGCAT CGAGGAATGC
GTGGGCGACG CCGATTTCAT CCAGGAGAGC GCCCCCGAGC GGCTCGACCT GAAGCTCGAC
CTGCACGCCA GGATCAGCGC CGCGGCGCGG CCCGACGTGC TGATCGGTTC CTCCACCTCG
GGCCTGCTGC CCAGCGAGTT CTACGCCGAG GCGAGCCACC CCGAGCGCTG CCTGGTCGGC
CACCCCTTCA ATCCGGTCTA CCTGCTGCCG CTGGTGGAGG TGGTCGGCGG CGAACGCACC
GCTGCCGAGG CCGTGCGGGC GGCGATGCGG GTCTACGAGT CGCTGGGCAT GCGTCCGCTG
CACGTACGCA AGGAAGTGCC CGGCTTCATC GCCGACCGCT TGCTCGAGGC GCTCTGGCGC
GAGGCGCTGC ACCTGGTCAA CGACGGCGTG GCCACGACCG GCGAGATCGA CGATGCGATC
CGCTTCGGCG CCGGCCTGCG CTGGTCGTTC ATGGGCACCT TCCTGACCTA CACCCTGGCC
GGTGGCAACG CCGGCATGCG CCACTTCATG GCGCAGTTCG GCCCGGCGCT GCAATTGCCC
TGGACCTACC TGCCGGCGCC GGAACTCACC GAAGCCCTGA TCGACCGGGT GGTGGAGGGC
ACCGCCGAGC AGCAGGGCGC GCGCAGCATC GCCGAGCTCG AGCGCTACCG CGACGACTGC
CTGCTGGCGG TGCTCGGGGC GATCAGGGAA ACCAAGGCCC GGCACGGCTT CGCCTTCGCC
GAGTGA
 
Protein sequence
MSFVTEIKTF AALGSGVIGS GWIARALAHG LDVVAWDPAP GAEAALRARV ANAWPALRKQ 
GLAPGAAQER LRFVASIEEC VGDADFIQES APERLDLKLD LHARISAAAR PDVLIGSSTS
GLLPSEFYAE ASHPERCLVG HPFNPVYLLP LVEVVGGERT AAEAVRAAMR VYESLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNDGV ATTGEIDDAI RFGAGLRWSF MGTFLTYTLA
GGNAGMRHFM AQFGPALQLP WTYLPAPELT EALIDRVVEG TAEQQGARSI AELERYRDDC
LLAVLGAIRE TKARHGFAFA E