Gene PA14_71100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71100 
Symbol 
ID4384972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6334259 
End bp6335326 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content70% 
IMG OID639328328 
Producthypothetical protein 
Protein accessionYP_793857 
Protein GI116053530 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC TCCCCGTCAA GACCGGTACC AGACCCCTGG CCCAGGTCCA GAAACTCATC 
CCCGGCCTGC TGCTCAGCGC CGCCCTGGCC GGCGCGGCGA TCCTCCTGGG TCGTTCGCAA
TGGTTGCAGC ACAACGGCAT CAGCGCGCTG ACCCTGGCCA TCGTGCTCGG CATCGTCGTC
GGCAACACCC TGTACCCTCG GATCGCCGCC GGCAGCGCCG CCGGCGTCGG CTTCTCCAAG
CAGATCCTGC TGCGCGCCGG GATCATCCTC TACGGCCTGC GCCTGACCTT CCAGGACATC
GCCGGCGTCG GATTGCACGG CGTGCTGCTG GACGCCCTGA TGCTCGCCAG CACCTTCGGC
CTGGCGTGCC TGCTCGGCAC CCGGCTGTTC GGCCTGGACC GCACCACCAC CCTGCTGATC
GGCGCCGGCA GTTCGATCTG CGGCGCCGCC GCGGTGATGG CCACCGAGCC GGTGGTGCGC
GGCCGCGCCG AACAGGTCGC GGTGGCGGTC TCCACCGTAG TGGTGTTCGG CACCCTGGGC
ATCTTCCTCT ATCCGGCGCT GTTCCAGTCC GACCAGGACT GGGGGCTGCT GCCACGCGAC
CCTGGCACCT GGGGCGTGTA CATCGGCGCC ACGGTGCACG AGGTGGCCCA GGTGGTCGCC
GCGGGTCGCT CGATCGGCAT CGAGGCAGCG GATACCGCAG TGATCGCCAA GATGGTCCGG
GTAATGATGT TGGCGCCCTT CCTGATCCTG CTCTCGGCCT GGCTGGCACG CGACAAGGCG
CACCGCCGGC AGCACAGCGG CGCGACCAAG ATCACCATTC CCTGGTTCGC CGTCGGCTTC
GTACTGGTCG CCGGGCTCAA CTCGCTGGTC AGCCTGCCGC CGGCGCTGGT CAGCCACGTC
AACGACCTCG ACACCTTCCT CCTGGCCATG GCGATGGCCG GCCTCGGCCT CGGCACGCAC
CTCTCGGCGA TCCGCCGCGC CGGCCTCAAG CCGCTGCTGC TGGCCGCCCT GCTATTCGCC
TGGCTGGTGC TCGGCGGTGG ATTCCTCACC CGCCTGGCGC TCGCCTGA
 
Protein sequence
MHTLPVKTGT RPLAQVQKLI PGLLLSAALA GAAILLGRSQ WLQHNGISAL TLAIVLGIVV 
GNTLYPRIAA GSAAGVGFSK QILLRAGIIL YGLRLTFQDI AGVGLHGVLL DALMLASTFG
LACLLGTRLF GLDRTTTLLI GAGSSICGAA AVMATEPVVR GRAEQVAVAV STVVVFGTLG
IFLYPALFQS DQDWGLLPRD PGTWGVYIGA TVHEVAQVVA AGRSIGIEAA DTAVIAKMVR
VMMLAPFLIL LSAWLARDKA HRRQHSGATK ITIPWFAVGF VLVAGLNSLV SLPPALVSHV
NDLDTFLLAM AMAGLGLGTH LSAIRRAGLK PLLLAALLFA WLVLGGGFLT RLALA