Gene PA14_71090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71090 
Symbol 
ID4385086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6333258 
End bp6334151 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID639328327 
ProductLysR family transcriptional regulator 
Protein accessionYP_793856 
Protein GI116053529 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA GTTTCCGTCA GCTCCAGATC TTCTGTGCGG TGGCTCGCTG CGGCAGTACC 
ACGGCGGCGG CGGAATCCAT CTCGCTGTCG CAGTCGGCCA CCAGCGCTGC GCTCAACGAG
CTGGAGTCGC AGCTTTCCAC GCGCCTGTTC GACCGGGTCG GCAAGCGCCT GCAACTGAAC
GAGGTCGGCC GCCGCTTCCT GCCCCAGGCA TTGCGCCTGC TCGACGGGGT GGCGCAACTG
GAGCAGCAGT TCGCGGTTTC CGCCGCGCCC CAGGCGAGCC TGACGGTGGC GGCCAGCAGC
ACCATCGGCA ACTACGTGCT GCCACGCCTG CTGGCCTCCT TCGAGCGGGA GCAGCCGGGG
GTGAGGGTCA ACGCCAGCAT CGGCAACACC GGTTCGGCGG TGCAGGACGT GGTGACCTTC
GCGGCGGACA TCGGCCTCAT CGAAGGCCCC TGCCACGAGC CGGGCCTGCG GGTGGAGCCC
TGGCTCGAGG ACAGCCTGAT CGTGGTGGCG GCGCCCGGCC ACCCGCTGGC CTTGCGCACC
CAGGTCTCCC GCGAGGCCCT GCGCCGTGCG CGCTGGCTGC TGCGCGAGCC CGGCTCGGGC
ACGCGCGAGG AGGTCAGCCA CGCCCTGCTG GGCCACCTGC ATTACCTGGA AGACAGCCTG
GACCTGGGCA GCTCCGAGGC GATCAAGCAC AGCGTCGCCG CCGGGCTGGG CATCAGTTGC
CTGTCGCGCT GGGTGGTCGA GGAACAGTTG GCCTCCGGCG CGCTGGTCGA ACTGCGCAGC
AGCCTGCCGC CGTTGCGCCG GCGTTTCTAC ATGCTGCGCC AGCGCGACAA GTTCCTCTCG
CCGGGCTTCG AGCGCTTCTG GGAACACTGT CGGGCGGGAC TCGGCGCCGG CTAG
 
Protein sequence
MALSFRQLQI FCAVARCGST TAAAESISLS QSATSAALNE LESQLSTRLF DRVGKRLQLN 
EVGRRFLPQA LRLLDGVAQL EQQFAVSAAP QASLTVAASS TIGNYVLPRL LASFEREQPG
VRVNASIGNT GSAVQDVVTF AADIGLIEGP CHEPGLRVEP WLEDSLIVVA APGHPLALRT
QVSREALRRA RWLLREPGSG TREEVSHALL GHLHYLEDSL DLGSSEAIKH SVAAGLGISC
LSRWVVEEQL ASGALVELRS SLPPLRRRFY MLRQRDKFLS PGFERFWEHC RAGLGAG