Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_71090 |
Symbol | |
ID | 4385086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6333258 |
End bp | 6334151 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639328327 |
Product | LysR family transcriptional regulator |
Protein accession | YP_793856 |
Protein GI | 116053529 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCA GTTTCCGTCA GCTCCAGATC TTCTGTGCGG TGGCTCGCTG CGGCAGTACC ACGGCGGCGG CGGAATCCAT CTCGCTGTCG CAGTCGGCCA CCAGCGCTGC GCTCAACGAG CTGGAGTCGC AGCTTTCCAC GCGCCTGTTC GACCGGGTCG GCAAGCGCCT GCAACTGAAC GAGGTCGGCC GCCGCTTCCT GCCCCAGGCA TTGCGCCTGC TCGACGGGGT GGCGCAACTG GAGCAGCAGT TCGCGGTTTC CGCCGCGCCC CAGGCGAGCC TGACGGTGGC GGCCAGCAGC ACCATCGGCA ACTACGTGCT GCCACGCCTG CTGGCCTCCT TCGAGCGGGA GCAGCCGGGG GTGAGGGTCA ACGCCAGCAT CGGCAACACC GGTTCGGCGG TGCAGGACGT GGTGACCTTC GCGGCGGACA TCGGCCTCAT CGAAGGCCCC TGCCACGAGC CGGGCCTGCG GGTGGAGCCC TGGCTCGAGG ACAGCCTGAT CGTGGTGGCG GCGCCCGGCC ACCCGCTGGC CTTGCGCACC CAGGTCTCCC GCGAGGCCCT GCGCCGTGCG CGCTGGCTGC TGCGCGAGCC CGGCTCGGGC ACGCGCGAGG AGGTCAGCCA CGCCCTGCTG GGCCACCTGC ATTACCTGGA AGACAGCCTG GACCTGGGCA GCTCCGAGGC GATCAAGCAC AGCGTCGCCG CCGGGCTGGG CATCAGTTGC CTGTCGCGCT GGGTGGTCGA GGAACAGTTG GCCTCCGGCG CGCTGGTCGA ACTGCGCAGC AGCCTGCCGC CGTTGCGCCG GCGTTTCTAC ATGCTGCGCC AGCGCGACAA GTTCCTCTCG CCGGGCTTCG AGCGCTTCTG GGAACACTGT CGGGCGGGAC TCGGCGCCGG CTAG
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Protein sequence | MALSFRQLQI FCAVARCGST TAAAESISLS QSATSAALNE LESQLSTRLF DRVGKRLQLN EVGRRFLPQA LRLLDGVAQL EQQFAVSAAP QASLTVAASS TIGNYVLPRL LASFEREQPG VRVNASIGNT GSAVQDVVTF AADIGLIEGP CHEPGLRVEP WLEDSLIVVA APGHPLALRT QVSREALRRA RWLLREPGSG TREEVSHALL GHLHYLEDSL DLGSSEAIKH SVAAGLGISC LSRWVVEEQL ASGALVELRS SLPPLRRRFY MLRQRDKFLS PGFERFWEHC RAGLGAG
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