Gene PA14_71070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71070 
Symbol 
ID4385084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6331592 
End bp6332695 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content67% 
IMG OID639328325 
ProductAraC family transcriptional regulator 
Protein accessionYP_793854 
Protein GI116053527 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGT ACGCGCCCGG AGTTCCGCCA CAGAACCGAA ATCCGCAGTC CATCGGCTTC 
CTGCTGCTGG ATAACTTCAC CCTGATCTCC CTGGCCTCGG CGGTGGAACC GTTGCGCATG
GCCAACCAGC TCTCGGGACG CGAACTCTAC CGCTGGCATA CGCTGAGCCT GGACGGCCGC
CAGGTCTGGG CCAGCGACGG CCTGCAGATC ACCCCCGACG CCGGTACCGA CAACGCCCCG
GCGGTGGATT GCGTGATCGT CTGCGGCGGC GTCGGCATCC AGCGCAGCGT CACCCGCGAG
CACGTCACTT TCCTCCAGGC CCAGGCCCGC CAGGGTCGGC GCCTCGGCGC GGTGTGCACC
GGCAGTTGGG CGCTGGCCCG CGCCGGCCTG CTCGACGGCT ACGATTGCAG CGTGCACTGG
GAATGCCTGG CGGCGATGCA GGAAGCCTTC CCCCGGGTGG CCATGAGCAC CCGCCTGTTC
TCCATCGACC GCAACCGCTT CACCTCTTCC GGCGGCACCG CGCCGATGGA CATGATGCTG
CACCTGATCG GCCGCGAGCA TGGCCGCGAG CTGTCGGCGG CGATCTCCGA GATGTTCATC
TACGAGCGCA TCCGCAACGA GCAGGACCAC CAGCGCGTGC CGCTCAAGCA CATGCTCGGC
ACCAACCAGC CGAAGTTGCA GGAGATCGTC GCGCTGATGG AGGCGAACCT GGAGGAACCG
ATCGACCTCG ACGAACTGGC GGTCTACGTC AACGTCTCGC GTCGCCAGCT CGAGCGGCTG
TTCCAGAAGT ACCTGCACTG CTCGCCGTCG CGCTACTACC TGAAGCTGCG CCTGATCCGC
GCCCGCCAGT TGCTCAAGCA GACGTCCATG TCGATCATCG AGGTGGCCTC GGTCTGCGGC
TTCGTCTCCA CCCCGCACTT CTCCAAGTGC TACCGCGAGT ACTTCGGCAT CCCGCCGCGT
GACGAGCGCC AGGGCCAGCC GCTGGGCCAG CCGGTGGTGC TGATGCCGAT CCCGCAGGAC
CTGGCGCTGA TGCCCAACTC CTCGGCGCTG TCGGCCCTAA GCCAGGCGCA GGGCGAGTCG
ACCTTCGCCA GCGTGCGGAT CTGA
 
Protein sequence
MTTYAPGVPP QNRNPQSIGF LLLDNFTLIS LASAVEPLRM ANQLSGRELY RWHTLSLDGR 
QVWASDGLQI TPDAGTDNAP AVDCVIVCGG VGIQRSVTRE HVTFLQAQAR QGRRLGAVCT
GSWALARAGL LDGYDCSVHW ECLAAMQEAF PRVAMSTRLF SIDRNRFTSS GGTAPMDMML
HLIGREHGRE LSAAISEMFI YERIRNEQDH QRVPLKHMLG TNQPKLQEIV ALMEANLEEP
IDLDELAVYV NVSRRQLERL FQKYLHCSPS RYYLKLRLIR ARQLLKQTSM SIIEVASVCG
FVSTPHFSKC YREYFGIPPR DERQGQPLGQ PVVLMPIPQD LALMPNSSAL SALSQAQGES
TFASVRI