| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_70690 |
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| Symbol | glcD |
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| ID | 4385255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 6295122 |
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| End bp | 6296621 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639328295 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_793829 |
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| Protein GI | 116053502 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TCTACGACGA GCGTCTGGAC GGTCCGCTGC CGCAGGTGGA CAAGGATGGC
CTGCTGGCCG AGTTGCGCCT CCGCCTGCCC GACCTCGAAC TGCTGCACGC CGCGGAAGAC
CTGCGTCCCT ACGAGTGCGA CGGACTCTCG GCGTATCGCT GCACGCCGTT GCTGGTGGCA
TTGCCGGAAC GCATCGAACA GGTTCAGGGC CTGCTCGCCC TCTGCCATCG GCTGAAGGTG
CCGGTCGTGG CGCGCGGTGC CGGCACCGGC CTGTCCGGCG GCGCGCTGCC GCTGGAGAAC
GGCGTGCTGC TGGTGATGGC GCGTTTCCGG CGGATCCTCG AGATCGATCC GCTGGGTCGT
TTCGCCCGGG TCCAGCCTGG CGTGCGCAAC CTGGCGATCT CCCAGGCCGC TGCCCCTCAT
GGTCTGTACT ACGCACCGGA CCCGTCCTCG CAGATCGCCT GCTCCATCGG CGGCAATGTC
GCGGAGAACG CCGGCGGCGT GCATTGCCTG AAGTACGGCC TGACCGTGCA CAACCTGTTG
CAGGTGGACA TCGTGACCCT GGAAGGCGAG CGCCTGAGCC TGGGGTCCAG CGCCCTGGAC
AGCGCCGGCT TCGACCTGCT GGCGCTGTTC ACCGGCTCCG AAGGGCTGCT CGGCGTGGTG
GTGGAGGTCA CCGTCAGGCT GTTGCCGCGC CCGCCGGTGG CGAAGGTCCT GCTGGCCAGC
TTCGACGATG TGGAAAGCGC CGGGCGGGCG GTGGCCGACC TGATCGGTGC CGGCATCGTC
CCGGCCGGGC TGGAAATGAT GGACAACCTG TCGATCCGCG CCGCCGAGGA CTTCATCCAT
GCCGGCTATC CGGTCGACGC GGCGGCGATC CTGCTCTGCG AACTGGATGG CGTGGAAGCC
GACGTGCACG AGGATTGCGA GCGGGTCCGC GAGCTGTTCG AGGCGGCTGG CGCCACATCG
GTGCGACAGG CCCAAGACGA GGCCGAGCGC CAGCGCTTCT GGGCCGGGCG CAAGAATGCG
TTTCCGGCGG TCGGGCGGAT TTCCCCCGAT TACTACTGCA TGGACGGCAG CATCCCGCGC
CGCGAGCTGC CGCGGGTGCT GCATGGCATC GCCGAGCTTT CGCGCGAATA CGGCCTGCGG
GTGGCCAACG TATTCCACGC CGGCGACGGC AACATGCACC CGCTGATCCT CTTCGACGCC
AACCTGCCGG GCGAGCTGGA GCGCGCCGAA GCGCTGGGCG GCAGGATCCT CGAGTTGTGC
GTGGCGGTAG GCGGCAGCAT CACCGGCGAA CATGGCGTCG GCCGCGAGAA GATCAACCAG
ATGTGCGCTC AGTTCAATGC CGACGAGCTG ACCCTGTTCC ACGCCGTGAA GGCGGCGTTC
GACCCGGCCG GGCTGCTCAA TCCCGGCAAG AACGTGCCCA CCCTGCATCG CTGCGCCGAG
TTCGGCGCCA TGCACGTCCA CCACGGTCGA CTGCCGTTCC CCGAACTGGA GCGTTTCTGA
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| Protein sequence | MNILYDERLD GPLPQVDKDG LLAELRLRLP DLELLHAAED LRPYECDGLS AYRCTPLLVA
LPERIEQVQG LLALCHRLKV PVVARGAGTG LSGGALPLEN GVLLVMARFR RILEIDPLGR
FARVQPGVRN LAISQAAAPH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
QVDIVTLEGE RLSLGSSALD SAGFDLLALF TGSEGLLGVV VEVTVRLLPR PPVAKVLLAS
FDDVESAGRA VADLIGAGIV PAGLEMMDNL SIRAAEDFIH AGYPVDAAAI LLCELDGVEA
DVHEDCERVR ELFEAAGATS VRQAQDEAER QRFWAGRKNA FPAVGRISPD YYCMDGSIPR
RELPRVLHGI AELSREYGLR VANVFHAGDG NMHPLILFDA NLPGELERAE ALGGRILELC
VAVGGSITGE HGVGREKINQ MCAQFNADEL TLFHAVKAAF DPAGLLNPGK NVPTLHRCAE
FGAMHVHHGR LPFPELERF
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