Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_70670 |
Symbol | glcF |
ID | 4385253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6292807 |
End bp | 6294033 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639328293 |
Product | glycolate oxidase iron-sulfur subunit |
Protein accession | YP_793827 |
Protein GI | 116053500 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA ACCTCTGCGA TTCCGCCCGG CAACGCGCCG AGGCCGCCGA AGCCGAGCGC ATCCTGCGCA GCTGCGTGCA CTGCGGTTTC TGCAACGCCA CCTGCCCGAC CTACCAGGAG CTGGGCGACG AACTCGACGG CCCGCGCGGA CGGATCTACC TGATCAAGCA GTTCCTCGAG CGCGACGAGG CCAGCGAGCG CACCCGCCTG CACCTCGATC GCTGCCTGAG CTGCCGCAAC TGCGAAACCA CCTGCCCATC CGGAGTCGAG TACCACAAGC TGCTGGATAT CGGCCGCGAC CTCCTCGCCG AACGCCTGCC GCGCGGCTTC CGGCAACGCC TGCTGCGCGA CGTGCTGCGC CTGCTGGCCC CGCGCCCGGG GTTGTTCGGC GTGCTGGCCG GCGCTGCCGG GCGGCTGAGG CCTCTGCTGC CTGAGGCGAT GCAGGGCAAG CTGCCACGTC GGGTCGCGGC GCCGGGCAGG CGGCCGCAGC CCCGGCATGC GCGGCGCGTG CTGCTGCTCG AAGGTTGCGT GCAGCCGGCG CTGTCGCCGA ATACCAACGC CGCCGCCGCG CGGGTTCTGG ACCGCCTGGG AATCAGCGTG ACGCCGGCGG CCGCGGCCGG CTGCTGCGGC GCGCTGGATT TCCACCTGGA TGCGCAGGAG CGCGGCCGCC AGCGCGCGCG GCGCAATATC GACGCCTGGT GGCCGTTGCT GCGCGAGGGT GCCGAGGCCA TCGTGCAGAC CGCCAGCGGC TGCGGCGCCT TCGTCAAGGA CTACGCCTAC CTGCTGCGCG ACGACCCACG GTACGCGGAC AAGGCGCGCG AGGTCGCCGC CGCTGCCCGC GACCTGGTGG AAGTGCTTCG CGACGAGCCG CTGGAGTCCC TCGGCCTGCG CTGCGACCAG CGCCTGGCAT TCCACTGCCC ATGCACACTG CAGCACGCGC AACGACTGGG CGGGGCCGTG GAGGCGGTGC TGCGGCGACT GGGCTTCCAT CTCACCGAGG TGGCCGACGG TCATCTCTGC TGCGGCTCCG CCGGCACCTA CTCGCTGACC CAGCCGGCGC TGTCCCGGCG TCTGCGCGAC AACCGCCTGG ACGCCCTGGA AAGCGGCGCG CCGGATGTCA TCGCCACGGC CAACGTCGGT TGCCAGGCCC ATCTCGACGG GGCCGGACGG ACCCCGGTAC GCCACTGGAT CGAGCTGCTC GACCAGGCCT TGCCCGGAGG AGAGTGA
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Protein sequence | MQTNLCDSAR QRAEAAEAER ILRSCVHCGF CNATCPTYQE LGDELDGPRG RIYLIKQFLE RDEASERTRL HLDRCLSCRN CETTCPSGVE YHKLLDIGRD LLAERLPRGF RQRLLRDVLR LLAPRPGLFG VLAGAAGRLR PLLPEAMQGK LPRRVAAPGR RPQPRHARRV LLLEGCVQPA LSPNTNAAAA RVLDRLGISV TPAAAAGCCG ALDFHLDAQE RGRQRARRNI DAWWPLLREG AEAIVQTASG CGAFVKDYAY LLRDDPRYAD KAREVAAAAR DLVEVLRDEP LESLGLRCDQ RLAFHCPCTL QHAQRLGGAV EAVLRRLGFH LTEVADGHLC CGSAGTYSLT QPALSRRLRD NRLDALESGA PDVIATANVG CQAHLDGAGR TPVRHWIELL DQALPGGE
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