Gene PA14_70470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_70470 
SymbolspoT 
ID4385101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6279150 
End bp6281255 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content65% 
IMG OID639328278 
Productguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 
Protein accessionYP_793812 
Protein GI116053485 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGGCA TAGACGCCTT CGCCGACAGA CTGTCGAGCT ACCTCGGGCC GGACCAGGTC 
AACCTGGTCC GCCGCGCCTA CTACTACGCC GAGCAGGCCC ACGACGGGCA ACGCCGCCGC
AGCGGCGAGC CGTACGTGAC CCACCCGCTG GCGGTCTCCA ACATCCTCGC CGACATGCAC
ATGGACCATC AGAGCCTGAT GGCCGCGATG CTGCACGACG TGATCGAGGA CACCGGCATC
GCCAAGGAAG CGCTCACCGC GCAGTTCGGC GAGACGGTTT CGGAACTGGT CGACGGGGTC
AGCAAGCTGA CCCAGATGAA CTTCGAGACC AAGGCCGAGG CCCAGGCCGA GAACTTCCAG
AAGATGGCCA TGGCCATGGC CCGCGATATC CGCGTGATCC TGGTCAAGCT GGCCGACCGC
CTGCACAACA TGCGCACCCT CGAGGTGCTG TCCGGCGAGA AGCGCCGGCG CATCGCCAAG
GAAACCCTGG AAATCTACGC GCCCATCGCC AACCGCCTGG GCATGCACAC CATGCGCGTG
GAGTTCGAGG ACCTCGGTTT CAAGGCCATG CACCCGATGC GCGCCGAGCG CATCCGCCAG
GCGGTGAAGA AGGCCCGCGG CAACCGCCGC GAGATCGTCG GCAAGATCCA GGAGTCGCTG
GTCAACTGCC TCGCCCGCGA AGGCATGGAA GGCCAGGTGA TCGGCCGCGA GAAGCACCTC
TACAGCATCT ACCAGAAGAT GCGCGGCAAG CGTAAGGCGT TCAACGAGAT CATGGACGTC
TACGCCTTCC GCATCATCGT CGACAAGGTC GATACCTGCT ATCGCGTACT GGGCGCCGTG
CACAGCCTGT ACAAGCCGTT CCCCGGACGC TTCAAGGACT ACATCGCGAT TCCCAAGGCC
AACGGCTACC AGTCGCTGCA TACCACCCTG TTCGGCATGC ACGGGGTGCC CATCGAGATC
CAGATCCGTA CCCGCGAGAT GGAGGAGATG GCCAACCACG GGATCGCCGC GCACTGGCTG
TACAAGTCCA ACGACGAGAC GCCCAAGGGC ACCCATGCCC GCGCCCGGCA ATGGGTGAAG
GGCGTGCTGG AACTGCAGCA GCGCGCCGGC AACTCGCTGG AATTCATCGA GAACGTGAAG
ATCGACCTGT TCCCGGACGA GGTCTACGTG TTCACGCCCA AGGGCCGCAT CATGGAACTG
CCCAAGGGTT CCACCGCGGT CGACTTCGCC TACGCGGTGC ACACCGACGT CGGCAACAGT
TGCATCGCCT GCCGCATCAA CCGCCGCCTG GCGCCGCTCT CCGAGCCGTT GCAGAGCGGC
CAGACGGTGG AAATCGTCAC CGCCCCGGGC GCCCGGCCGA ACCCGGCCTG GCTGAGCTTC
GTGGTCACCG GCAAGGCGCG CACCCATATC CGCCATGCGC TCAAGCTGCA ACGCCGCTCC
GAGTCGATCA ACCTCGGCGA GCGCCTGCTG AACAAGACCC TCACCGGCTT CGACAGCCAC
CTCGAGAAGA TTCCCCAGGA ACGCATCCAG GCCGTGCTCG CCGAGTACCG CATGGAAGTC
TTCGAGGACC TGCTGGAAGA GATCGGCCTG GGCAACCGCA TGGCCTACGT GGTCGCCCGC
CGCCTGCTGT CCAGCGAGGG CGAGGAAGCG CCGAGCGCCG AGGGTCCGCT GGCGATCCGC
GGCACCGAAG GCCTGGTCCT GAGCTACGCC AAGTGCTGCA CGCCGATTCC CGGCGACCCG
ATCGTCGGCC ACCTGTCCGC CGGCAAGGGC ATGGTGGTGC ACTTGGAAAG CTGCAAGAAC
ATCAGCGAAG TACGCCACAA CCCGGAAAAA TGCATCCAGC TCAGCTGGGC CAAGGATGTC
ACCGGCGAAT TCAATGTCGA ACTGCGCGTC GAGCTGGAGC ACCAGCGTGG CCTGATCGCC
CTGCTCGCCA CCAGCGTCAA CGCGGCCGAC GGCAACATCG AGAAGATCAG CATGGACGAG
CGCGACGGTC GCATCAGCGT GGTCCAGCTG GTCGTCAGCG TGCACGATCG CGTCCACCTG
GCCCGCGTCA TCAAGAAGCT GCGCGCCCTC AAGGGAGTGA TCCGGATCAC CCGCCTGCGC
AGCTGA
 
Protein sequence
MPGIDAFADR LSSYLGPDQV NLVRRAYYYA EQAHDGQRRR SGEPYVTHPL AVSNILADMH 
MDHQSLMAAM LHDVIEDTGI AKEALTAQFG ETVSELVDGV SKLTQMNFET KAEAQAENFQ
KMAMAMARDI RVILVKLADR LHNMRTLEVL SGEKRRRIAK ETLEIYAPIA NRLGMHTMRV
EFEDLGFKAM HPMRAERIRQ AVKKARGNRR EIVGKIQESL VNCLAREGME GQVIGREKHL
YSIYQKMRGK RKAFNEIMDV YAFRIIVDKV DTCYRVLGAV HSLYKPFPGR FKDYIAIPKA
NGYQSLHTTL FGMHGVPIEI QIRTREMEEM ANHGIAAHWL YKSNDETPKG THARARQWVK
GVLELQQRAG NSLEFIENVK IDLFPDEVYV FTPKGRIMEL PKGSTAVDFA YAVHTDVGNS
CIACRINRRL APLSEPLQSG QTVEIVTAPG ARPNPAWLSF VVTGKARTHI RHALKLQRRS
ESINLGERLL NKTLTGFDSH LEKIPQERIQ AVLAEYRMEV FEDLLEEIGL GNRMAYVVAR
RLLSSEGEEA PSAEGPLAIR GTEGLVLSYA KCCTPIPGDP IVGHLSAGKG MVVHLESCKN
ISEVRHNPEK CIQLSWAKDV TGEFNVELRV ELEHQRGLIA LLATSVNAAD GNIEKISMDE
RDGRISVVQL VVSVHDRVHL ARVIKKLRAL KGVIRITRLR S